BLASTN Hits
Sequence similarity hits between all identified islands and islands in the Pre_GI database were identified by means of BLASTN
E-value threshold was set at 10 ^ -1.
The query is displayed in the information box at the top.
The search boxes will filter all subject hits to obtain specific hits.
It is also possible to order the lists by means of highlighted column headings.
Order hit subject list by means of columns
Subject Host Description - This will list subject hits alphabetically according to their hosts.
E-value - Subject list is ordered by ascending e-values.
Bit score - Default. Order list by descending bit scores.
Subject
This column indicates the specific subject in the Pre_GI database found to have a hit with the query.
Subject is hyperlinked to the island page where it is located.
Visual representation of the hits are possible and available as BLASTN or BLASTP svg.
The text file generated for use in the visual representation is also available and contains additional information.