Pre_GI Gene

Host: CP002185:3627992 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002185:3627992 Escherichia coli W, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
362799236310963105multidrug efflux system proteinQuickGO ontologyBLASTP
36309533631243291hypothetical protein
36313493631570222predicted outer membrane proteinQuickGO ontologyBLASTP
3631573363164169Plasmid_R1162 ncRNAQuickGO ontology
363200136330261026BLASTP
363309436342751182predicted amino-acid transporter subunitQuickGO ontologyBLASTP
363428536353881104predicted amino-acid transporter subunitQuickGO ontologyBLASTP
36353963636154759predicted amino-acid transporter subunitQuickGO ontologyBLASTP
363638536364991155S ribosomal RNA of rrnD operonQuickGO ontologyBLASTP
3636541363661676tRNA-ThrQuickGO ontologyBLASTP
363663036367441155S ribosomal RNA of rrnD operonQuickGO ontologyBLASTP
36368413639742290223S ribosomal RNA of rrnD operonQuickGO ontologyBLASTP
3639928364000376tRNA-AlaQuickGO ontologyBLASTP
3640046364012277tRNA-IleQuickGO ontologyBLASTP
36401963641725153016S ribosomal RNA of rrnD operonQuickGO ontologyBLASTP
36422053642759555conserved proteinQuickGO ontologyBLASTP
36427353642992258conserved proteinQuickGO ontologyBLASTP
36429893643807819dehydroshikimate reductase NADP-binding proteinQuickGO ontologyBLASTP
36438123644384573predicted ribosome maturation factorQuickGO ontologyBLASTP
36443893644931543predicted DNA topoisomeraseQuickGO ontologyBLASTP
36449603645433474conserved proteinQuickGO ontologyBLASTP
364540536465291125DNA protecting protein DprAQuickGO ontologyBLASTP
36466593647168510peptide deformylaseQuickGO ontologyBLASTP
3647183364813094810-formyltetrahydrofolateL-methionyl-tRNAfMet N-formyltransferaseQuickGO ontologyBLASTP
36481763649465129016S rRNA m5C967 methyltransferase S-adenosyl-L-methionine-dependentQuickGO ontologyBLASTP
364948736508631377NAD-binding component of TrK potassium transporterQuickGO ontologyBLASTP
36509933651403411mechanosensitive channelQuickGO ontologyBLASTP
36514003651618219conserved proteinQuickGO ontologyBLASTP
36516743652099426DNA-binding transcriptional activator in response to ZnIIQuickGO ontologyBLASTP