Pre_GI Gene

Host: NC_000962:1870842 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000962:1870842 Mycobacterium tuberculosis H37Rv, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18699221870845924ornithine carbamoyltransferaseQuickGO ontologyBLASTP
18708421871354513arginine repressorQuickGO ontologyBLASTP
187136318725591197argininosuccinate synthaseQuickGO ontologyBLASTP
187263918740511413argininosuccinate lyaseQuickGO ontologyBLASTP
187416018752211062Possible chalcone synthase pks10QuickGO ontologyBLASTP
187530418816846381Probable polyketide synthase pks7QuickGO ontologyBLASTP
188170418865124809Probable polyketide synthase pks8QuickGO ontologyBLASTP
188651218880201509Probable polyketide synthase pks17QuickGO ontologyBLASTP
188802618910793054Probable polyketide synthase pks9QuickGO ontologyBLASTP
189122618922871062Possible chalcone synthase pks11QuickGO ontologyBLASTP
189227018935621293Probable cytochrome P450 139 CYP139QuickGO ontologyBLASTP
18935771894230654PROBABLE SECOND PART OF MACROLIDE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTERQuickGO ontologyBLASTP
189422418953421119PROBABLE FIRST PART OF MACROLIDE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTERQuickGO ontologyBLASTP