Pre_GI Gene

Host: NC_000962:2791019 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000962:2791019 Mycobacterium tuberculosis H37Rv, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
278928027910221743POSSIBLE TRANSMEMBRANE PHOSPHOLIPID BIOSYNTHESIS BIFUNCTIONNAL ENZYME PLSC PUTATIVE L-3-PHOSPHOSERINE PHOSPHATASE O-PHOSPHOSERINE PHOSPHOHYDROLASE QuickGO ontologyBLASTP
279101927924941476hypothetical proteinBLASTP
279272327939881266PROBABLE CARBOXYLESTERASE LIPQQuickGO ontologyBLASTP
27943502795120771enoyl-CoA hydrataseQuickGO ontologyBLASTP
279530127973852085PE-PGRS FAMILY PROTEINQuickGO ontologyBLASTP
279746728008803414PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN LUXR-FAMILYQuickGO ontologyBLASTP
28008462801145300HYPOTHETICAL ALANINE RICH PROTEINQuickGO ontologyBLASTP
280125428062364983PE-PGRS FAMILY PROTEINQuickGO ontologyBLASTP
28066652807288624hypothetical proteinBLASTP
28072782808030753hypothetical proteinBLASTP
28080832808304222hypothetical proteinBLASTP
28083102808735426hypothetical proteinBLASTP
280875828099391182dihydrolipoamide acetyltransferaseQuickGO ontologyBLASTP
280993628109821047PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT BETA SUBUNIT PDHB PYRUVATE DECARBOXYLASE PYRUVATE DEHYDROGENASE PYRUVIC DEHYDROGENASEQuickGO ontologyBLASTP
281099328120961104PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT ALPHA SUBUNIT PDHA PYRUVATE DECARBOXYLASE PYRUVATE DEHYDROGENASE PYRUVIC DEHYDROGENASEQuickGO ontologyBLASTP
28123552813176822PROBABLE CITRATE PRO-3S-LYASE BETA SUBUNIT CITE CITRASE CITRATASE CITRITASE CITRIDESMOLASE CITRASE ALDOLASEQuickGO ontologyBLASTP
28131732813730558POSSIBLE OXIDASE REGULATORY-RELATED PROTEINQuickGO ontologyBLASTP
281372728149111185POSSIBLE ACYL-CoA DEHYDROGENASE FADE19 MMGCQuickGO ontologyBLASTP