Pre_GI Gene

Host: NC_002506:324552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002506:324552 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
324552325088537acetyltransferase putativeQuickGO ontologyBLASTP
325225325740516lipoprotein BlcQuickGO ontologyBLASTP
325890326387498hypothetical proteinBLASTP
326384326656273hypothetical proteinBLASTP
326882327046165hypothetical proteinBLASTP
327161327271111hypothetical protein
327418327870453hypothetical proteinBLASTP
328018328314297hypothetical proteinBLASTP
328280328558279DNA-damage-inducible protein JQuickGO ontologyBLASTP
328799329122324hypothetical proteinBLASTP
329165329266102hypothetical protein
329437329580144hypothetical proteinBLASTP
329859330257399biphenyl-23-diol 12-dioxygenase III-related proteinQuickGO ontologyBLASTP
330452330703252hypothetical proteinBLASTP
332490332978489hypothetical proteinBLASTP
333106333768663hypothetical proteinBLASTP
333953334219267hypothetical proteinBLASTP
334206334451246hypothetical proteinBLASTP
334535335341807hypothetical proteinBLASTP
335550335651102hypothetical proteinBLASTP
335633335815183hypothetical proteinBLASTP
3360313370351005microcin immunity protein MccFQuickGO ontologyBLASTP
337188337547360hypothetical proteinBLASTP
337820338053234hypothetical proteinBLASTP
338321338827507hypothetical proteinBLASTP
338972339370399biphenyl-23-diol 12-dioxygenase III-related proteinQuickGO ontologyBLASTP
339528339830303hypothetical proteinBLASTP
340025340276252hypothetical proteinBLASTP
340545340970426hypothetical proteinBLASTP
341170341799630hypothetical proteinBLASTP
342012342491480H-REV 107-related proteinQuickGO ontologyBLASTP
342679343092414hypothetical proteinBLASTP
343243343521279hypothetical proteinBLASTP
343518343886369relB proteinQuickGO ontologyBLASTP
343997344512516lipoprotein BlcQuickGO ontologyBLASTP
344577345173597hypothetical proteinBLASTP
345481345582102hypothetical proteinBLASTP
345564345746183hypothetical proteinBLASTP
345853346419567hypothetical proteinBLASTP
346568347194627hypothetical proteinBLASTP
347308348015708hypothetical proteinBLASTP
348713348892180hypothetical proteinBLASTP
349072349501430BLASTP
349629349928300plasmid stabilization element ParE putativeQuickGO ontologyBLASTP
349915350376462hypothetical proteinBLASTP
350396350974579hypothetical proteinBLASTP
351085351393309hypothetical proteinBLASTP
351512352195684hypothetical proteinBLASTP
352409352675267hypothetical proteinBLASTP
352830353237408hypothetical proteinBLASTP
353709354644936hypothetical proteinBLASTP
3548623558841023hypothetical proteinBLASTP
355817356431615hypothetical proteinBLASTP
356492356866375hypothetical proteinBLASTP
357184358056873transposase OrfAB subunit BQuickGO ontologyBLASTP
358053358397345transposase OrfAB subunit AQuickGO ontologyBLASTP