Pre_GI Gene

Host: NC_003197:2327474 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:2327474 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
232747423284811008nucleoid-associated protein NdpAQuickGO ontologyBLASTP
23286612328888228putative cytoplasmic proteinQuickGO ontologyBLASTP
232892023306801761putative hydrolaseQuickGO ontologyBLASTP
23309612331431471DNA polymerase V subunitQuickGO ontologyBLASTP
23314922331782291virulence proteinQuickGO ontologyBLASTP
233213023339591830O-antigen acetylaseQuickGO ontologyBLASTP
23340132334456444putative cytoplasmic proteinQuickGO ontologyBLASTP
23348342335361528putative phage tail fiber assembly proteinQuickGO ontologyBLASTP
233536423366051242hypothetical proteinBLASTP
23366662337184519hypothetical proteinBLASTP
23371982337527330putative inner membrane proteinQuickGO ontologyBLASTP
233782423391551332hypothetical proteinBLASTP
23391842339552369putative phage antiterminatorQuickGO ontologyBLASTP
23395672340556990putative cytoplasmic proteinQuickGO ontologyBLASTP
234088523432512367leucine-rich repeat proteinQuickGO ontologyBLASTP
23434202343623204putative phage tail fiber proteinQuickGO ontologyBLASTP
23439202344711792putative tail fiber protein of phageQuickGO ontologyBLASTP
23450142345217204virulence proteinQuickGO ontologyBLASTP
23454092345972564putative outer membrane proteinQuickGO ontologyBLASTP
23467022347349648response regulatorQuickGO ontologyBLASTP
234739323484361044putative heme lyase subunitQuickGO ontologyBLASTP
23484332348990558heme lyasedisulfide oxidoreductaseQuickGO ontologyBLASTP
234898723509181932cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23509152351394480periplasmic heme-dependent peroxidaseQuickGO ontologyBLASTP
23513912351603213heme exporter protein CQuickGO ontologyBLASTP
23516002352337738heme exporter proteinQuickGO ontologyBLASTP
23523892353048660heme exporter proteinQuickGO ontologyBLASTP
23530452353662618heme exporter proteinQuickGO ontologyBLASTP
23536832354285603periplasmic nitrate reductaseQuickGO ontologyBLASTP
23542952354744450periplasmic nitrate reductaseQuickGO ontologyBLASTP
23548602355729870quinol dehydrogenase membrane componentQuickGO ontologyBLASTP
23557162356411696quinol dehydrogenase periplasmic componentQuickGO ontologyBLASTP
235641823589042487periplasmic nitrate reductaseQuickGO ontologyBLASTP
23589012359164264periplasmic nitrate reductaseQuickGO ontologyBLASTP
23591542359645492electron transfer proteinQuickGO ontologyBLASTP
23600592360553495ecotin precursorQuickGO ontologyBLASTP
236076223624051644putative ABC-type multidrugproteinlipid transport system ATPase componentQuickGO ontologyBLASTP
23624812363131651DNA repair system proteinQuickGO ontologyBLASTP
236313423641951062O6-methylguanine-DNA methyltransferasetranscription activatorrepressorQuickGO ontologyBLASTP