Pre_GI Gene

Host: NC_003198:3924952 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:3924952 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39249523925617666DNA repair protein RadCQuickGO ontologyBLASTP
3925835392607123750S ribosomal protein L28QuickGO ontologyBLASTP
3926092392625916850S ribosomal protein L33QuickGO ontologyBLASTP
39263573927166810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
39271943927673480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
3927682392895912783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
392940439304381035lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
393043539315591125lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
39315523932349798lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
39323903932773384hypothetical proteinBLASTP
39327973933465669hypothetical proteinBLASTP
393352539346041080lipopolysaccharide 16-galactosyltransferaseQuickGO ontologyBLASTP
393461039356231014lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
393564139366511011lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
39366743937372699lipopolysaccharide core biosynthesis proteinQuickGO ontologyBLASTP
39375223938331810lipopolysaccharide core biosynthesis protein RfaZQuickGO ontologyBLASTP
393843039395751146lipopolysaccharide 12-N-acetylglucosaminetransferaseQuickGO ontologyBLASTP
393963239408461215O-antigen ligaseQuickGO ontologyBLASTP
39408863941839954lipopolysaccharide heptosyltransferase-1QuickGO ontologyBLASTP
394183939428851047ADP-heptose-LPS heptosyltransferase IIQuickGO ontologyBLASTP
39428883943820933ADP-L-Glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
3944023394521911972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
394522939462541026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
394674939477831035putative glycosyltransferaseQuickGO ontologyBLASTP
39477703948732963hypothetical proteinBLASTP
394873639500191284hypothetical proteinBLASTP
395002939515521524phosphoglyceromutaseQuickGO ontologyBLASTP