Pre_GI Gene

Host: NC_003198:4453457 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:4453457 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44534574453849393hypothetical proteinBLASTP
44538464454814969hypothetical proteinBLASTP
445482944562591431hypothetical proteinBLASTP
44562564456588333hypothetical proteinBLASTP
445659244580971506hypothetical proteinBLASTP
44581334458522390hypothetical proteinBLASTP
44587464459105360possible exported proteinQuickGO ontologyBLASTP
445939344606401248hypothetical proteinBLASTP
44606524461266615hypothetical proteinBLASTP
44614774462019543hypothetical proteinBLASTP
44632854464205921hypothetical proteinBLASTP
44647224465231510hypothetical proteinBLASTP
44653274465707381hypothetical proteinBLASTP
44661734466757585hypothetical proteinBLASTP
44667544467050297hypothetical proteinBLASTP
44671284467586459hypothetical proteinBLASTP
446767544696241950hypothetical proteinBLASTP
44696964470604909hypothetical proteinBLASTP
44706784471577900hypothetical proteinBLASTP
44716194471978360hypothetical proteinBLASTP
44720784472347270hypothetical proteinBLASTP
447247944737531275DNA polymerase IVQuickGO ontologyBLASTP
4473753450773033978BLASTP
44739734474350378hypothetical protein
44744374474655219putative positive regulator of late gene transcriptionQuickGO ontologyBLASTP
447472344758231101putative regulator of late gene expressionQuickGO ontologyBLASTP
44758204476305486putative phage tail proteinQuickGO ontologyBLASTP
447630544790852781hypothetical proteinBLASTP
44790784479197120hypothetical proteinBLASTP
44792124479514303putative phage tail proteinQuickGO ontologyBLASTP
44795694480084516probable major tail tube proteinQuickGO ontologyBLASTP
448009444812661173probable major tail sheath proteinQuickGO ontologyBLASTP
44813694481590222BLASTP
44818014482523723invasion-associated secreted proteinQuickGO ontologyBLASTP
44827214483128408putative phage tail fibre proteinQuickGO ontologyBLASTP
448313544847541620probable phage tail fibre proteinQuickGO ontologyBLASTP
44847514485356606putative phage tail proteinQuickGO ontologyBLASTP
44853494486257909probable phage baseplate assembly proteinQuickGO ontologyBLASTP
44862444486603360phage baseplate assembly proteinQuickGO ontologyBLASTP
44866004487178579putative phage baseplate assembly proteinQuickGO ontologyBLASTP
44872474487693447putative phage tail completion proteinQuickGO ontologyBLASTP
44876864488117432putative phage tail proteinQuickGO ontologyBLASTP
44882134488638426putative regulatory proteinQuickGO ontologyBLASTP
44886384489015378hypothetical proteinBLASTP
44890204489490471putative lysozymeQuickGO ontologyBLASTP
44895104489725216possible secretion proteinQuickGO ontologyBLASTP
44897294489932204putative phage tail proteinQuickGO ontologyBLASTP
44899324490396465putative capsid completion proteinQuickGO ontologyBLASTP
44904904491140651putative phage terminaseQuickGO ontologyBLASTP
449114444922081065putative major capsid proteinQuickGO ontologyBLASTP
44922254493058834putative capsid proteinQuickGO ontologyBLASTP
449320144949671767probable terminase subunitQuickGO ontologyBLASTP
449496444960101047probable capsid portal proteinQuickGO ontologyBLASTP
44960594496754696hypothetical proteinBLASTP
449677444978381065hypothetical proteinBLASTP
449783544988991065hypothetical proteinBLASTP
44989094499127219hypothetical proteinBLASTP
44992264499656431BLASTP
449982445022382415hypothetical proteinBLASTP
45022294503089861DNA adenine methylaseQuickGO ontologyBLASTP
45030864503670585putative exonucleaseQuickGO ontologyBLASTP
45036674503894228hypothetical proteinBLASTP
45038944504127234hypothetical proteinBLASTP
45041954504536342hypothetical proteinBLASTP
45045004504700201hypothetical proteinBLASTP
45047084505217510phage regulatory proteinQuickGO ontologyBLASTP
45052504505492243phage regulatory proteinQuickGO ontologyBLASTP
45056094506241633phage repressor protein cIQuickGO ontologyBLASTP
450624545072701026phage integraseQuickGO ontologyBLASTP