Pre_GI Gene

Host: NC_003911:2042389 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:2042389 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
204238920434231035pyridoxal-phosphate dependent enzymeQuickGO ontologyBLASTP
204340420458362433mechanosensitive ion channel family proteinQuickGO ontologyBLASTP
20458262046548723hypothetical proteinBLASTP
2046619204670890tRNA-SerQuickGO ontologyBLASTP
20470832047958876hypothetical proteinBLASTP
204795520508522898hypothetical proteinBLASTP
20528902053081192DNA-binding protein putativeQuickGO ontologyBLASTP
205383720550571221site-specfic recombinase phage integrase familyQuickGO ontologyBLASTP
20553922055997606Tat twin-arginine translocation pathway signal sequence domain proteinQuickGO ontologyBLASTP
205631620579291614peptidoglycan binding protein putativeQuickGO ontologyBLASTP
205796420590551092UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferaseQuickGO ontologyBLASTP
20590872059344258acyl carrier protein putativeQuickGO ontologyBLASTP
205935320605611209beta-ketoacyl synthase family proteinQuickGO ontologyBLASTP
20606402061314675invasion associated family proteinQuickGO ontologyBLASTP
206170920632621554hypothetical proteinBLASTP
206340120647051305branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
206470220657121011branched-chain amino acid ABC transporter permease proteinQuickGO ontologyBLASTP