Pre_GI Gene

Host: NC_003911 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:3453764 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34537643454060297chorismate mutaseQuickGO ontologyBLASTP
34541253454490366ribosomal protein S16QuickGO ontologyBLASTP
34545023455137636cobalamin biosynthesis protein BluBQuickGO ontologyBLASTP
3455284345578750416S rRNA processing protein RimMQuickGO ontologyBLASTP
3456324345654522250S ribosomal protein L31QuickGO ontologyBLASTP
3456557345694038450S ribosomal protein L19QuickGO ontologyBLASTP
34573423458151810glycosyl hydrolase family 25QuickGO ontologyBLASTP
34582623458993732tRNA guanine-N1-methyltransferaseQuickGO ontologyBLASTP
34590263459808783methyltransferase homologQuickGO ontologyBLASTP
34599313460599669glutathione S-transferase family proteinQuickGO ontologyBLASTP
34606993461157459transcriptional regulator MarR familyQuickGO ontologyBLASTP
34611633461615453hypothetical protein
3461953346202977tRNA-MetQuickGO ontology
346207234621891185S ribosomal RNAQuickGO ontologyBLASTP
34623933465287289523S ribosomal RNAQuickGO ontologyBLASTP
3465737346581276tRNA-AlaQuickGO ontologyBLASTP
3465886346596277tRNA-IleQuickGO ontology
34661783467632145516S ribosomal RNAQuickGO ontologyBLASTP
34683593468955597hypothetical proteinBLASTP
34689593469858900hypothetical proteinBLASTP
346996534715511587glutamate synthase family proteinQuickGO ontologyBLASTP
34715173472068552hypothetical protein
34721223472562441hypothetical protein
34725663473261696hypothetical proteinBLASTP
347344434760622619ATP-dependent Clp protease ATP-binding subunit ClpBQuickGO ontologyBLASTP
34762663476538273hypothetical protein
34766463477380735orotidine 5-phosphate decarboxylaseQuickGO ontologyBLASTP
34777063478155450NUDIX domain proteinQuickGO ontologyBLASTP
347822434794861263DNA polymerase IVQuickGO ontologyBLASTP