Pre_GI Gene

Host: NC_003911:3864852 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:3864852 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
386485238661651314TRAP dicarboxylate family transporter DctM subunitQuickGO ontologyBLASTP
38661723866705534hypothetical proteinBLASTP
38667863867760975bacterial extracellular solute-binding protein family 7QuickGO ontologyBLASTP
386779838690631266oxidoreductase FAD-bindingQuickGO ontologyBLASTP
386917338703031131muconate cycloisomerase IQuickGO ontologyBLASTP
38704033871320918transcriptional regulator LysR familyQuickGO ontologyBLASTP
3871397387148690tRNA-SerQuickGO ontology
38719883872626639transglycosylase domain proteinQuickGO ontologyBLASTP
38724803872593114hypothetical protein
387371938753801662muticopper oxidase domain proteinQuickGO ontologyBLASTP
38753773875853477hypothetical protein
387605038825446495type I secretion target repeat proteinQuickGO ontologyBLASTP
38833573883926570ISSpo7 transposaseQuickGO ontologyBLASTP
38840953884751657hypothetical proteinBLASTP
388515838863031146acetylornithine deacetylaseQuickGO ontologyBLASTP
38863003887235936transcriptional regulator LysR familyQuickGO ontologyBLASTP
388729038883991110Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
38884253889099675hypothetical proteinBLASTP
38891043889520417endoribonuclease L-PSP family proteinQuickGO ontologyBLASTP
388952238906641143Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
389084938921231275hypothetical proteinBLASTP
3892522389259877tRNA-ArgQuickGO ontologyBLASTP
389271538937401026transcriptional regulator LacI familyQuickGO ontologyBLASTP
389374538949591215hypothetical proteinBLASTP
38950503895820771HpcHHpaI aldolase family proteinQuickGO ontologyBLASTP
389588538972941410decarboxylase pyridoxal-dependentQuickGO ontologyBLASTP
38973163898296981extradiol ring-cleavage dioxygenase family proteinQuickGO ontologyBLASTP