Pre_GI Gene

Host: NC_004431:4223232 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:4223232 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42222864223245960Hypothetical protein yibQ precursorQuickGO ontologyBLASTP
422323242242661035Putative glycosyl transferase yibDQuickGO ontologyBLASTP
422449642255211026hypothetical proteinBLASTP
422450542255301026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4225540422673611972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
42269504227882933ADP-L-glycero-D-manno-heptose-6-epimeraseQuickGO ontologyBLASTP
422789242289381047ADP-heptose--LPS heptosyltransferase IIQuickGO ontologyBLASTP
42289424229922981Lipopolysaccharide heptosyltransferase-1QuickGO ontologyBLASTP
422999242312451254Lipid A-core surface polymer ligaseQuickGO ontologyBLASTP
42312914232274984Putative beta13-glucosyltransferaseQuickGO ontologyBLASTP
423235642333841029UDP-galactosegalactosyl LPS alpha12-galactosyltransferaseQuickGO ontologyBLASTP
42334104234102693Lipopolysaccharide core biosynthesis protein rfaYQuickGO ontologyBLASTP
42341124235107996Lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
423512442361401017Lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
42361564236962807Lipopolysaccharide core biosynthesis protein rfaPQuickGO ontologyBLASTP
423694642380701125Lipopolysaccharide core biosynthesis protein rfaGQuickGO ontologyBLASTP
423806742391251059Lipopolysaccharide core biosynthesis glycosyl transferase rfaQQuickGO ontologyBLASTP
4239538424081512783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
42408234241302480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
42413414242150810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
4242248424241516850S ribosomal protein L33QuickGO ontologyBLASTP
4242436424267223750S ribosomal protein L28QuickGO ontologyBLASTP
42428894243563675DNA repair protein RadCQuickGO ontologyBLASTP
424365742449491293phosphopantothenoylcysteine synthasedecarboxylaseQuickGO ontologyBLASTP
42449274245385459deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
42454504246088639nucleoid occlusion proteinQuickGO ontologyBLASTP