Pre_GI Gene

Host: NC_004463:1898648 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004463:1898648 Bradyrhizobium japonicum USDA 110, complete genome

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
189864819003931746hydrogenase maturation proteinQuickGO ontologyBLASTP
190038119015321152hydrogenase expressionformation proteinQuickGO ontologyBLASTP
190152919025751047hydrogenase expressionformation proteinQuickGO ontologyBLASTP
190296019040721113alanine dehydrogenaseQuickGO ontologyBLASTP
19046111904805195ferredoxinQuickGO ontologyBLASTP
190494919060131065RSalpha putative transposaseQuickGO ontologyBLASTP
19062891906924636RSbeta putative transposaseQuickGO ontologyBLASTP
19069211907280360putative transposaseQuickGO ontologyBLASTP
190782519093271503nitrogenase molybdenum-iron protein alpha chainQuickGO ontologyBLASTP
190939319109491557nitrogenase molybdenum-iron protein beta chainQuickGO ontologyBLASTP
191104219126851644nitrogenase molybdenum-cofactor synthesis proteinQuickGO ontologyBLASTP
191269519141041410nitrogenase molybdenum-cofactor synthesis proteinQuickGO ontologyBLASTP
19141011914496396iron-molibdenum cofactor processing proteinQuickGO ontologyBLASTP
19145031914967465hypothetical proteinBLASTP
19150201915181162hypothetical proteinBLASTP
19151921915485294ferredoxinQuickGO ontologyBLASTP
19158201916194375hypothetical protein
19164771917211735host-inducible protein A homologQuickGO ontologyBLASTP
19178101918193384hypothetical proteinBLASTP
19182151918934720hypothetical protein
19190651919385321R etli iscN homologQuickGO ontologyBLASTP
191970919208901182nitrogenase metalloclusters biosynthesis proteinQuickGO ontologyBLASTP
19208871921111225nitrogen fixation proteinQuickGO ontologyBLASTP
19215501921771222hypothetical protein
192185919233581500FeMo cofactor biosynthesis proteinQuickGO ontologyBLASTP
19233691923593225ferredoxin-like proteinQuickGO ontologyBLASTP
19235951924158564iron-sulfur cofactor synthesis proteinQuickGO ontologyBLASTP
19243571924710354hypothetical protein
19248041925148345hypothetical proteinBLASTP
19254211925717297hypothetical proteinBLASTP
19258681926215348ferredoxinQuickGO ontologyBLASTP
19266211927211591outer membrane proteinQuickGO ontologyBLASTP
19275741927999426hypothetical proteinBLASTP
19280171928385369hypothetical proteinBLASTP
19285671929451885dinitrogenase reductase proteinQuickGO ontologyBLASTP
19295561930374819molybdenum processing proteinQuickGO ontologyBLASTP
19310291931370342nitrogenase stabilizingprotective proteinQuickGO ontologyBLASTP
19315061931715210hypothetical proteinBLASTP
193232119334301110electron transfer flavoprotein alpha chainQuickGO ontologyBLASTP
193344219347491308flavoproteinQuickGO ontologyBLASTP
19347881935084297probable ferredoxinQuickGO ontologyBLASTP
19352961935844549alkyl hydroperoxide reductaseQuickGO ontologyBLASTP
19358511936405555alkyl hydroperoxide reductaseQuickGO ontologyBLASTP
19363571937313957hypothetical proteinBLASTP
193743419387411308putative transposaseQuickGO ontologyBLASTP
193875919399101152molybdenum transport ATP-binding protein modC homologQuickGO ontologyBLASTP
19406021941015414putative transposaseQuickGO ontologyBLASTP
19410121941365354putative transposaseQuickGO ontologyBLASTP
194143819430421605putative transposaseQuickGO ontologyBLASTP
19430981943388291hypothetical protein
19439531944312360hypothetical proteinBLASTP
19447871945089303hypothetical proteinBLASTP
19458941946583690hypothetical proteinBLASTP
19467731947111339hypothetical proteinBLASTP
19471191947499381hypothetical proteinBLASTP
19476581948377720hypothetical proteinBLASTP
19484321949181750hypothetical proteinBLASTP
19497171950529813similar to zinc proteaseQuickGO ontologyBLASTP
19504411951160720similar to proteaseQuickGO ontologyBLASTP
19511601951747588similar to proteaseQuickGO ontologyBLASTP
19517441952412669similar to zinc proteaseQuickGO ontologyBLASTP
19531991953651453hypothetical proteinBLASTP
19536261954048423hypothetical proteinBLASTP
19540691954491423hypothetical proteinBLASTP
19546161955206591hypothetical proteinBLASTP
195523719573362100RhcV proteinQuickGO ontologyBLASTP
19573461957774429hypothetical proteinBLASTP
19577771958313537hypothetical proteinBLASTP
19583471959240894hypothetical proteinBLASTP
19595911959899309hypothetical proteinBLASTP
19599971960515519hypothetical proteinBLASTP
196080819622621455hypothetical proteinBLASTP
196241719634811065putative transposaseQuickGO ontologyBLASTP
19640521964255204hypothetical proteinBLASTP