Pre_GI Gene

Host: NC_005139:305420 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005139:305420 Vibrio vulnificus YJ016 chromosome I, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
305420305878459diacylglycerol kinaseQuickGO ontologyBLASTP
3058823065927113-deoxy-D-manno-octulosonic-acid kinaseQuickGO ontologyBLASTP
3066373084721836predicted hydrolaseQuickGO ontologyBLASTP
308484309347864putative glycosyl transferaseQuickGO ontologyBLASTP
3093443104051062dTDP-D-glucose 46-dehydrataseQuickGO ontologyBLASTP
310488311375888D-glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
311372312253882dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
312253312810558dTDP-6-deoxy-D-xylo-4-hexulose-35-epimeraseQuickGO ontologyBLASTP
312811313497687putative WavS proteinQuickGO ontologyBLASTP
3136013147521152lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
3147523158701119hypothetical proteinBLASTP
315923316864942acyltransferase family proteinQuickGO ontologyBLASTP
3167773178681092hypothetical proteinBLASTP
3179763191661191predicted nucleoside-diphosphate sugar epimeraseQuickGO ontologyBLASTP
3191793203241146putative aminotransferaseQuickGO ontologyBLASTP
3203393215171179UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
3215243225971074sialic acid synthaseQuickGO ontologyBLASTP
322590323225636putative acetyltransferaseQuickGO ontologyBLASTP
3232403243011062putative sugar-phosphate nucleotide transferaseQuickGO ontologyBLASTP
324301325299999predicted dehydrogenaseQuickGO ontologyBLASTP
325292325993702CMP-N-acetylneuraminic acid synthetaseQuickGO ontologyBLASTP
325993326766774flagellin modification protein AQuickGO ontologyBLASTP
326780327424645glutamine amidotransferaseQuickGO ontologyBLASTP
327408328226819imidazoleglycerol-phosphate synthaseQuickGO ontologyBLASTP
3282523295201269putitive LPS biosynthesis proteinQuickGO ontologyBLASTP
3295243306601137putitive LPS biosynthesis proteinQuickGO ontologyBLASTP
330653331204552acetyltransferaseQuickGO ontologyBLASTP