Pre_GI Gene

Host: NC_005773:866157 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005773:866157 Pseudomonas syringae pv. phaseolicola 1448A, complete genome

Host Lineage: Pseudomonas savastanoi; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This is gram-negative bacterium pathogenic in plants. Characterized as causing halo blight on beans (Phaseolus vulgaris). This bacterium is closely related to Pseudomonas syringae pv. glycinea and Pseudomonas syringae pv. savastanoi and produces phaseolotoxin, which is a phytotoxin. Strain 1448A is a natural occurring rifampicin-resistant mutant strain and contains a non-functional homolog of avrPphE.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
866157867119963Ribosomal large subunit pseudouridine synthase DPseudouridine synthase Uracil hydrolyaseQuickGO ontologyBLASTP
867116867844729conserved hypothetical protein TIGR00726QuickGO ontologyBLASTP
8680168705802565clpB proteinQuickGO ontologyBLASTP
87087687095176tRNA-AsnQuickGO ontologyBLASTP
87098187105777tRNA-ProQuickGO ontologyBLASTP
87106387113876tRNA-LysQuickGO ontologyBLASTP
87123487131077tRNA-ProQuickGO ontologyBLASTP
8716228728391218hypothetical proteinBLASTP
872815873132318ISPsy18 transposase truncatedQuickGO ontologyBLASTP
8732058747371533hypothetical proteinBLASTP
874874875842969hypothetical proteinBLASTP
8760918779051815hypothetical proteinBLASTP
8780898795401452DNA topoisomerase IIIQuickGO ontologyBLASTP
8798288813661539ATPase involved in DNA repair putativeQuickGO ontologyBLASTP
881817882149333BLASTP
882507883145639transcriptional regulator TetR familyQuickGO ontologyBLASTP
8844458870032559glycosyl hydrolase family 3QuickGO ontologyBLASTP
887336887881546hypothetical protein
887878888834957site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
889391889831441type IV pilus protein PilM putativeQuickGO ontologyBLASTP
889863890840978type IV pilus protein PilV2 putative truncatedQuickGO ontologyBLASTP
891099891575477hypothetical proteinBLASTP
892074892562489hypothetical proteinBLASTP
8928018940421242type III effector HopAJ1QuickGO ontologyBLASTP
894853895116264type III effector HopAT1QuickGO ontology
895983896399417RNA polymerase-binding protein DksAQuickGO ontologyBLASTP
896434896655222hypothetical protein
896731896976246BLASTP
8974168989631548type III effector HopG1QuickGO ontologyBLASTP
899429900226798thioredoxin domain protein DsbA familyQuickGO ontologyBLASTP
9005409016431104ISPsy19 transposaseQuickGO ontologyBLASTP
9016889039762289response regulatorsensor histidine kinaseQuickGO ontologyBLASTP
904056904868813EAL domain proteinQuickGO ontologyBLASTP
906115906249135hypothetical protein
909675910190516adhesin major subunit pilinQuickGO ontologyBLASTP
910262910975714periplasmic chaperone protein putativeQuickGO ontologyBLASTP
9110779121801104ISPsy19 transposaseQuickGO ontologyBLASTP
9120999138321734response regulatorsensor histidine kinase putativeQuickGO ontologyBLASTP
914293914931639DNA-binding response regulator LuxR familyQuickGO ontologyBLASTP
9169549186811728outer membrane protein OMP85 family putativeQuickGO ontologyBLASTP
9187279234784752haemagglutination activity domain familyQuickGO ontologyBLASTP
9245179255331017RulBQuickGO ontologyBLASTP