Pre_GI Gene

Host: NC_006177:324363 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:324363 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
324098324415318hypothetical proteinBLASTP
324363325286924alphabeta hydrolaseQuickGO ontologyBLASTP
325464325652189hypothetical protein
3259363269731038hypothetical proteinBLASTP
327052327987936hypothetical proteinBLASTP
3281513299531803oligopeptide ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
330107331078972putative acetyltransferaseQuickGO ontology
331098331337240hypothetical protein
3312713322931023oligoeptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
3322903332941005ABC transporter ATP binding proteinQuickGO ontologyBLASTP
333308334195888oligopeptide ABC transporter permease proteinQuickGO ontologyBLASTP
334202335176975oligopeptide ABC transporter permease proteinQuickGO ontologyBLASTP
3353513369221572putative beta-N-acetylglucosaminidaseQuickGO ontologyBLASTP
336993337724732hypothetical proteinBLASTP
3377843389351152putative beta-lactamaseQuickGO ontologyBLASTP
3390023401321131hypothetical proteinBLASTP
3401913421281938N-acetyl-beta-hexosaminidaseQuickGO ontologyBLASTP
3423303436251296transposaseQuickGO ontologyBLASTP
3437133449211209transposase-like proteinQuickGO ontologyBLASTP
344990345370381hypothetical proteinBLASTP
3456673469591293transposaseQuickGO ontologyBLASTP
3470963492552160hypothetical proteinBLASTP
349324350013690hypothetical proteinBLASTP
3499703517451776hypothetical proteinBLASTP
3517423528541113hypothetical proteinBLASTP
352914353474561hypothetical protein
353666353992327hypothetical protein
3540793552241146transposaseQuickGO ontologyBLASTP
355137356000864hypothetical proteinBLASTP
356181356570390hypothetical proteinBLASTP
356642357298657hypothetical proteinBLASTP
357584357802219hypothetical proteinBLASTP
357954358184231putative glutaredoxinQuickGO ontology
3582153592551041ribonucleoside-diphosphate reductase beta subunitQuickGO ontologyBLASTP
3592773616252349ribonucleoside-diphosphate reductase alpha subunitQuickGO ontologyBLASTP
362114362695582hypothetical protein
362686363042357hypothetical protein
3630573651382082hypothetical protein
365131366051921hypothetical protein
3660133676381626transposase-like proteinQuickGO ontologyBLASTP
367802368032231hypothetical proteinBLASTP
368087368941855sporulation specific N-acetylmuramoyl-L-alanine amidaseQuickGO ontologyBLASTP
368957369385429hypothetical protein
369549369848300hypothetical protein