Pre_GI Gene

Host: NC_006361:4597718 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:4597718 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
459648945977211233hypothetical proteinBLASTP
459771846018664149hypothetical proteinBLASTP
460186646031251260hypothetical proteinBLASTP
46034674603832366putative transposaseQuickGO ontologyBLASTP
46040044604249246putative transposaseQuickGO ontologyBLASTP
46043004604554255putative transposaseQuickGO ontologyBLASTP
46045574604955399putative transposaseQuickGO ontologyBLASTP
46048354605119285putative transposaseQuickGO ontologyBLASTP
46051164605484369putative transposaseQuickGO ontologyBLASTP
460554846089313384hypothetical proteinBLASTP
460893346106031671hypothetical proteinBLASTP
461060346134192817hypothetical proteinBLASTP
461353246169423411putative helicaseQuickGO ontologyBLASTP
46170644617387324hypothetical protein
461753646185731038putative invertaseQuickGO ontologyBLASTP
46182424618640399putative invertaseQuickGO ontologyBLASTP
46186664619304639hypothetical proteinBLASTP
46191774619515339hypothetical proteinBLASTP
4619501461957979tRNA-AlaQuickGO ontologyBLASTP
46197204620460741hypothetical proteinBLASTP
462049546217811287putative transporterQuickGO ontologyBLASTP
462177846234661689phosphoglucomutaseQuickGO ontologyBLASTP
46234634623891429camphor resistance protein CrcBQuickGO ontologyBLASTP
46239114624333423camphor resistance protein CrcBQuickGO ontologyBLASTP
46245004625183684putative transcriptional regulatorQuickGO ontologyBLASTP
462523846265361299putative oxidoreductaseQuickGO ontologyBLASTP
46265594627305747putative Sir2 family regulatorQuickGO ontologyBLASTP
46274304628341912hypothetical proteinBLASTP
46285224628935414hypothetical proteinBLASTP