Pre_GI Gene

Host: NC_007086:2887875 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007086:2887875 Xanthomonas campestris pv. campestris str. 8004, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
288787528966198745filamentous haemagglutininQuickGO ontologyBLASTP
289953629009451410integraserecombinaseQuickGO ontologyBLASTP
290096529065715607DNA helicase related proteinQuickGO ontologyBLASTP
29066852907455771hypothetical proteinBLASTP
290773529093781644plasmid mobilization proteinQuickGO ontologyBLASTP
290985429116891836MchC proteinQuickGO ontologyBLASTP
29116462912110465putative hemolysin activation proteinQuickGO ontologyBLASTP
291217329134501278putative transport transmembrane proteinQuickGO ontologyBLASTP
29136012914131531hypothetical proteinBLASTP
29142472914837591hypothetical protein
29148462915580735hydroxyproline-rich glycoprotein DZ-HRGPQuickGO ontology
291568529179012217hypothetical proteinBLASTP
291789829192261329hypothetical proteinBLASTP
291943229232263795hypothetical proteinBLASTP
29232232924212990hypothetical proteinBLASTP
292420929259061698putative NTPase VagAQuickGO ontologyBLASTP
29260232926463441hypothetical protein
29267142927025312hypothetical proteinBLASTP
29269192927467549hypothetical proteinBLASTP
29277532928598846plasmid mobilization proteinQuickGO ontologyBLASTP
29291342929622489hypothetical protein
29296002930250651hypothetical protein
29305062930826321hypothetical protein
293112129322631143phage-related integraseQuickGO ontologyBLASTP
29324152932918504hypothetical proteinBLASTP
29337962934689894hypothetical protein
293481929381183300hypothetical proteinBLASTP
293830729395781272hypothetical proteinBLASTP
293973629409231188RNA-directed DNA polymeraseQuickGO ontologyBLASTP
29409112941405495hypothetical protein
294162629426931068ankyrin repeat proteinQuickGO ontologyBLASTP
294295429440061053hypothetical proteinBLASTP
29443052945219915Predicted transcriptional regulatorQuickGO ontologyBLASTP
294526929463391071hypothetical proteinBLASTP
29463362946833498hypothetical proteinBLASTP
29468302947726897ATPase of the AAA classQuickGO ontologyBLASTP
29479972948887891phage associated proteinQuickGO ontologyBLASTP
29488842949441558hypothetical proteinBLASTP
29495142950464951hypothetical proteinBLASTP
29506362951376741hypothetical protein - Escherichia coli plasmid ColIa fragment giQuickGO ontologyBLASTP
29513152952016702plasmid-related proteinQuickGO ontology
29519642952593630hypothetical protein
29531802953908729hypothetical proteinBLASTP
295390529551911287hypothetical proteinBLASTP
29551882956009822hypothetical proteinBLASTP
295601029578631854hypothetical proteinBLASTP
29580412958586546hypothetical proteinBLASTP
295888529604171533aldehyde dehydrogenaseQuickGO ontologyBLASTP
29605612961031471hypothetical proteinBLASTP
29610282961801774hypothetical proteinBLASTP
296180729628621056dihydroorotate dehydrogenaseQuickGO ontologyBLASTP
296285929639111053UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
29639052964816912integral membrane proteinQuickGO ontologyBLASTP
29649612965665705putative resistance proteinQuickGO ontologyBLASTP
29658602966357498transport proteinQuickGO ontologyBLASTP
296601829671211104Prop transport proteinQuickGO ontologyBLASTP
29672652967996732phosphatidylglycerophosphatase B-related proteinQuickGO ontologyBLASTP
2967977296924212664-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseQuickGO ontologyBLASTP
296936129705901230two-component system sensor proteinQuickGO ontologyBLASTP
29705872971162576two-component system regulatory proteinQuickGO ontologyBLASTP