Pre_GI Gene

Host: NC_007492:4563981 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:4563981 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45639814564538558Transcriptional Regulator TetR familyQuickGO ontologyBLASTP
456453545654288943-oxoacyl-acyl carrier protein synthaseQuickGO ontologyBLASTP
456553445658092763-oxoacyl-acyl carrier protein synthase IIQuickGO ontologyBLASTP
45658424566636795Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
45668534567188336Competence protein ComEA helix-hairpin-helix regionQuickGO ontologyBLASTP
456733345684091077Glycosyl transferase family 2QuickGO ontologyBLASTP
45684064569365960Glycosyl transferase family 2QuickGO ontologyBLASTP
45693584569825468MaoC-like dehydrataseQuickGO ontologyBLASTP
45698224570490669transferase hexapeptide repeatQuickGO ontologyBLASTP
457051745715991083DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
45716204572549930hypothetical proteinBLASTP
457253645738521317ABC transporter-likeQuickGO ontologyBLASTP
45738424574660819ABC-2QuickGO ontologyBLASTP
45748224575079258hypothetical protein
457510645771001995Polysaccharide biosynthesis protein CapDQuickGO ontologyBLASTP
45773974578386990Glycosyl transferase family 2QuickGO ontologyBLASTP
457842645794361011Glycosyl transferase family 4QuickGO ontologyBLASTP
45794334580395963NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
45803924581315924Glycosyl transferase family 2QuickGO ontologyBLASTP
45813694582259891Glucose-1-phosphate thymidylyltransferase long formQuickGO ontologyBLASTP
45822564583149894dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
458314645842221077dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
45844504584698249hypothetical proteinBLASTP
45847174585013297Integration host factor beta subunitQuickGO ontologyBLASTP
45851914585475285lipoprotein putativeQuickGO ontologyBLASTP
458631145874381128DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
45874354587947513GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
45879444588741798ABC-2QuickGO ontologyBLASTP
45887384589496759ABC transporter-likeQuickGO ontologyBLASTP