Pre_GI Gene

Host: NC_007946:4050762 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007946:4050762 Escherichia coli UTI89, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40498164050775960hypothetical protein YibQ precursorQuickGO ontologyBLASTP
405076240517961035putative glycosyl transferase YibDQuickGO ontologyBLASTP
405202640530511026hypothetical proteinBLASTP
405203540530601026threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4053070405426611972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
40544804055412933ADP-L-glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
405542240564681047ADP-heptose--lps heptosyltransferase II involved in lipopolysaccharide core biosynthesisQuickGO ontologyBLASTP
40564724057452981Lipopolysaccharide heptosyltransferase-1QuickGO ontologyBLASTP
405752240587751254putative lipid A-core surface polymer ligaseQuickGO ontologyBLASTP
40588214059804984putative beta13-glucosyltransferaseQuickGO ontologyBLASTP
405988640609141029UDP-galactosegalactosyl LPS alpha12-galactosyltransferaseQuickGO ontologyBLASTP
40609404061632693lipopolysaccharide core biosynthesis protein rfaYQuickGO ontologyBLASTP
40616424062637996lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
406265440636701017lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
40636864064492807lipopolysaccharide core biosynthesis protein rfaPQuickGO ontologyBLASTP
406447640656001125lipopolysaccharide core biosynthesis glucosyltransferase IQuickGO ontologyBLASTP
406559740666551059lipopolysaccharide core biosynthesis glycosyl transferase rfaQQuickGO ontologyBLASTP
4067068406834512783-deoxy-D-manno-octulosonic-acid transferase KDO transferaseQuickGO ontologyBLASTP
40683534068832480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
40688714069680810formamidopyrimidine DNA glycosylaseQuickGO ontologyBLASTP
40696944069969276hypothetical protein
4069778406994516850S ribosomal subunit protein L33QuickGO ontologyBLASTP
4069966407020223750S ribosomal subunit protein L28QuickGO ontologyBLASTP
40704194071093675DNA repair proteinQuickGO ontologyBLASTP
407118740724791293flavoprotein affecting synthesis of DNA and pantothenate metabolismQuickGO ontologyBLASTP
40724574072915459deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
40729804073618639putative transcriptional regulatorQuickGO ontologyBLASTP