Pre_GI Gene

Host: NC_008146:1016446 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:1016446 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10159801016459480hypothetical proteinBLASTP
10164461016874429MaoC-like dehydrataseQuickGO ontologyBLASTP
10168921017401510hypothetical proteinBLASTP
1017559101763476tRNA-TrpQuickGO ontology
10177141018157444SecE subunit of protein translocation complexQuickGO ontologyBLASTP
10181941019006813NusG antitermination factorQuickGO ontologyBLASTP
10190441019472429ribosomal protein L11QuickGO ontologyBLASTP
10196101020317708ribosomal protein L1QuickGO ontologyBLASTP
10203721020650279hypothetical proteinBLASTP
10210981021682585hypothetical proteinBLASTP
10219671022266300Ribosomal protein L1-like proteinQuickGO ontologyBLASTP
10224081023400993EndonucleaseexonucleasephosphataseQuickGO ontologyBLASTP
10237271024110384transposase IS3IS911QuickGO ontologyBLASTP
10241881025027840Integrase catalytic regionQuickGO ontologyBLASTP
102523510265631329UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
10268411027314474protein tyrosine phosphataseQuickGO ontologyBLASTP
102816710295791413hypothetical proteinBLASTP
102976510310211257polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
103103910320911053hypothetical proteinBLASTP
10321221032442321hypothetical proteinBLASTP
103240410337231320transposase mutator typeQuickGO ontologyBLASTP
103419010363222133acyltransferase 3QuickGO ontologyBLASTP
103697010382591290O-antigen polymeraseQuickGO ontologyBLASTP
10383321038877546Acetyltransferase isoleucine patch superfamily-like proteinQuickGO ontologyBLASTP
10388801039815936hypothetical proteinBLASTP
10399201040783864Methyltransferase FkbMQuickGO ontologyBLASTP
104129610425521257glycosyl transferase group 1QuickGO ontologyBLASTP
10425671043541975NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
104353810445931056GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP