Pre_GI Gene

Host: NC_008148:3024867 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008148:3024867 Rubrobacter xylanophilus DSM 9941, complete genome

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30248673025544678two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
302554630269611416periplasmic sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
30270503027670621Propeptide PepSY amd peptidase M4QuickGO ontologyBLASTP
30277113028685975peptidase S1 and S6 chymotrypsinHapQuickGO ontologyBLASTP
30286913028936246hypothetical protein
30289293029630702Integral membrane protein TerCQuickGO ontologyBLASTP
302983430310241191Pyridoxal-5-phosphate-dependent enzyme beta subunitQuickGO ontologyBLASTP
303107530321151041Oligopeptidedipeptide ABC transporter ATP-binding protein-like proteinQuickGO ontologyBLASTP
303211230331641053Oligopeptidedipeptide ABC transporter ATP-binding protein-like proteinQuickGO ontologyBLASTP
303316130341651005binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
30341693034960792binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
303509430367821689Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
303692330380531131major facilitator superfamily MFS_1QuickGO ontologyBLASTP
30381273038666540carbohydrate kinase FGGYQuickGO ontologyBLASTP
303873930400111273BLASTP
304021130412571047Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
30412753042015741amidohydrolase 2QuickGO ontologyBLASTP
30420473042844798ABC transporter relatedQuickGO ontologyBLASTP
30428413043611771binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
30436123044412801binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
304440930459081500amidohydrolaseQuickGO ontologyBLASTP
30459213046715795CreatininaseQuickGO ontologyBLASTP