Pre_GI Gene

Host: NC_008253:334467 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:334467 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3344673364311965TonB-dependent receptorQuickGO ontologyBLASTP
336450337241792hypothetical proteinBLASTP
3374423387041263putative cobalamin synthesis proteinQuickGO ontologyBLASTP
338889339026138hypothetical protein
339159339758600transposase for insertion sequence IS100QuickGO ontologyBLASTP
339758340537780insertion sequence ATP-binding proteinQuickGO ontologyBLASTP
340588341205618putative IS orfQuickGO ontologyBLASTP
341225341572348transposaseQuickGO ontologyBLASTP
341569341931363putative IS orfQuickGO ontologyBLASTP
342066342251186hypothetical protein
342718343605888putative LysR-family transcriptional regulatorQuickGO ontologyBLASTP
3436523451481497lysyl-tRNA synthetase heat inducibleQuickGO ontologyBLASTP
345442346164723putative regulatory helix-turn-helix protein AraC familyQuickGO ontology
3463563484822127lysine decarboxylaseQuickGO ontologyBLASTP
3485133498231311amino acid permeaseQuickGO ontologyBLASTP
350210350572363putative IS orfQuickGO ontologyBLASTP
350873351055183hypothetical protein
351386352258873hypothetical proteinBLASTP
3525863557143129putative autotransporterQuickGO ontologyBLASTP
356041356859819hypothetical proteinBLASTP
356951357436486possible anti-restriction proteinQuickGO ontologyBLASTP
357452357928477RadC-like DNA repair proteinQuickGO ontologyBLASTP
357997358218222hypothetical protein YeeTQuickGO ontologyBLASTP
358381358749369hypothetical protein YeeUQuickGO ontologyBLASTP
358839359216378hypothetical protein YeeVQuickGO ontologyBLASTP
359213359701489hypothetical proteinBLASTP
359668359910243hypothetical proteinBLASTP
360025360849825hypothetical proteinBLASTP
3609423622611320phage integraseQuickGO ontologyBLASTP
362627362965339CP4-like integraseQuickGO ontologyBLASTP
363400363924525transcriptional regulator MarR family PapX proteinQuickGO ontologyBLASTP
3640503681804131SepAQuickGO ontologyBLASTP
368508368711204hypothetical protein
368773368988216insertion element IS1 12356 protein InsAQuickGO ontologyBLASTP
369290369466177InsB proteinQuickGO ontologyBLASTP
369890370075186hypothetical proteinBLASTP
370290370904615putative integral membrane proteinQuickGO ontologyBLASTP
371153371482330putative ferredoxinQuickGO ontologyBLASTP
371789372499711hypothetical protein YagV precursorQuickGO ontologyBLASTP
3724683741111644hypothetical protein YagWQuickGO ontologyBLASTP
3741013766262526hypothetical protein YagX precursorQuickGO ontologyBLASTP
376652377368717hypothetical protein YagY precursorQuickGO ontologyBLASTP
377377377964588hypothetical protein YagZ precursorQuickGO ontologyBLASTP
378039378581543hypothetical protein YkgKQuickGO ontologyBLASTP
379053379343291hypothetical proteinBLASTP
379665379805141putative 50S ribosomal protein L36QuickGO ontologyBLASTP
37980538007126750S ribosomal protein L31 type BQuickGO ontologyBLASTP
3810073821491143probable NADH-dependent flavin oxidoreductase YqiGQuickGO ontologyBLASTP
382321383241921hypothetical protein YcjYQuickGO ontologyBLASTP
383398384324927putative lysR-family transcriptional regulatorQuickGO ontologyBLASTP
384524385417894putative LysR-family transcriptional regulatory proteinQuickGO ontologyBLASTP
385448386437990putative aldoketo reductaseQuickGO ontologyBLASTP
386464387315852putative aldoketo reductase familyQuickGO ontologyBLASTP
3878813921284248putative adhesininvasinQuickGO ontologyBLASTP
392253393110858putative bacterial regulatory helix-turn-helix proteins AraC familyQuickGO ontologyBLASTP
393358394227870putative aldoketo reductaseQuickGO ontologyBLASTP
394387394980594hypothetical proteinBLASTP
394992395228237hypothetical secreted proteinQuickGO ontologyBLASTP
3953373966621326probable pyridine nucleotide-disulfide oxidoreductase YkgCQuickGO ontologyBLASTP
396889397743855putative transcriptional regulator AraC family proteinQuickGO ontologyBLASTP
398270398989720hypothetical protein YkgEQuickGO ontologyBLASTP
3990004004271428putative electron transport protein YkgFQuickGO ontologyBLASTP
400420401115696hypothetical proteinBLASTP
401189401386198hypothetical protein
401358402026669hypothetical protein YkgHQuickGO ontologyBLASTP
4022104045072298putative autotransporterQuickGO ontologyBLASTP
404549405310762putative cytoplasmic proteinQuickGO ontologyBLASTP
405464406258795hypothetical proteinBLASTP
406588407151564putative phage integraseQuickGO ontologyBLASTP
407041407247207hypothetical protein
407257407511255hypothetical protein
407967408194228hypothetical proteinBLASTP
4082364099511716choline dehydrogenaseQuickGO ontologyBLASTP
4099204113921473betaine aldehyde dehydrogenaseQuickGO ontologyBLASTP
411406412011606TetR-family regulatory proteinQuickGO ontologyBLASTP
411910412125216hypothetical protein
4121224141552034high-affinity choline transport proteinQuickGO ontologyBLASTP
4150314161191089hypothetical protein EAL domainQuickGO ontologyBLASTP