Pre_GI Gene

Host: NC_008253:4735418 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:4735418 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
473541847366801263prophage P4 integraseQuickGO ontologyBLASTP
47367804737043264hypothetical proteinBLASTP
473713247406473516putative superfamily I DNA helicasesQuickGO ontologyBLASTP
474075647422551500hypothetical protein YjgX putative sulfataseQuickGO ontologyBLASTP
47424304743170741OmpA family proteinQuickGO ontologyBLASTP
47433884743756369hypothetical proteinBLASTP
47438574744027171hypothetical protein
47441494744322174hypothetical protein
47445324744693162hypothetical proteinBLASTP
47450874745302216hypothetical protein
47453214745875555PapX proteinQuickGO ontologyBLASTP
47459014746134234hypothetical proteinBLASTP
474613547471421008PapGQuickGO ontologyBLASTP
47471864747689504PapF proteinQuickGO ontologyBLASTP
47477644748240477PapE proteinQuickGO ontologyBLASTP
47483124748848537PapK fimbrial adapter precursorQuickGO ontologyBLASTP
47488584749439582protein PapJ precursorQuickGO ontologyBLASTP
47494764750210735chaperone protein PapDQuickGO ontologyBLASTP
475028147528032523outer membrane usher protein PapC precursorQuickGO ontologyBLASTP
47528504753437588PapHQuickGO ontologyBLASTP
47535074754124618PapAQuickGO ontologyBLASTP
47542994754613315major pilu subunit operon regulatory protein PapBQuickGO ontologyBLASTP
47549174755195279hypothetical protein
47553174755604288hypothetical proteinBLASTP
47557554756123369hypothetical proteinBLASTP
47562624756471210hypothetical protein
47566294756778150hypothetical proteinBLASTP
47568124756970159hypothetical proteinBLASTP
47570344757369336probable transposase proteinQuickGO ontologyBLASTP
47575584757989432putative transposaseQuickGO ontologyBLASTP
475820847592841077putative transposaseQuickGO ontologyBLASTP
47593674759609243putative transposaseQuickGO ontologyBLASTP
475998147614171437hemolysin DQuickGO ontologyBLASTP
476143647635592124alpha-hemolysin translocation ATP-binding protein HlyBQuickGO ontologyBLASTP
476363047667043075hemolysin AQuickGO ontologyBLASTP
47667164767228513hemolysin-activating lysine-acyltransferase HlyCQuickGO ontologyBLASTP
47673164767537222hypothetical protein
47676944767897204hypothetical protein
47683554768618264hypothetical protein
47686924769462771hypothetical proteinBLASTP
47694624770061600hypothetical membrane proteinQuickGO ontologyBLASTP
47702024770921720DNA-binding response regulatorQuickGO ontologyBLASTP
47709224771773852hypothetical membrane proteinQuickGO ontologyBLASTP
47718064772393588putative histidine kinase-like ATPasesQuickGO ontologyBLASTP
47724734772841369hypothetical transposase-like proteinQuickGO ontologyBLASTP
47731554773295141hypothetical protein
47733224773642321putative transposaseQuickGO ontologyBLASTP
47736714773937267hypothetical proteinBLASTP
47740174774265249hypothetical protein
477461847762851668hypothetical proteinBLASTP
477629947792592961hypothetical proteinBLASTP