Pre_GI Gene

Host: NC_008278:175500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:175500 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1756241773271704Putative transcriptional regulator GntR-familyQuickGO ontologyBLASTP
17798917806375tRNA-AspQuickGO ontology
178531178674144hypothetical protein
178590178976387hypothetical protein
179081180004924putative oxidoreductaseQuickGO ontologyBLASTP
179964180788825putative enoyl-CoA hydratase-isomeraseQuickGO ontologyBLASTP
180813181424612hypothetical protein putative Thioesterase superfamilyQuickGO ontologyBLASTP
1815371826851149putative NADH-dependent flavin oxidoreductaseQuickGO ontologyBLASTP
182682183179498hypothetical proteinBLASTP
183176183766591putative Transcriptional regulatorQuickGO ontologyBLASTP
183836184108273hypothetical protein
184165185880171623-dihydroxybenzoate-AMP ligaseQuickGO ontologyBLASTP
1859211870841164hypothetical protein putative Thiolase-like domainQuickGO ontologyBLASTP
187150187554405hypothetical proteinBLASTP
187551188306756Putative short-chain type dehydrogenasereductaseQuickGO ontologyBLASTP
188341189117777putative Enoyl-CoA hydrataseQuickGO ontologyBLASTP
189177189869693putative short chain dehydrogenasereductaseQuickGO ontologyBLASTP
189953190732780Hydantoin racemaseQuickGO ontologyBLASTP
1907601919381179putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
1919351931041170putative Acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
1932821955912310putative transcriptional regulatorQuickGO ontologyBLASTP
1957261968381113Alcohol dehydrogenaseQuickGO ontologyBLASTP
1968891984481560NAD-dependent aldehyde dehydrogenaseQuickGO ontologyBLASTP
1985111997401230Putative cytochrome P450 reductaseQuickGO ontologyBLASTP
200171200353183hypothetical protein
200424201338915hypothetical proteinBLASTP
2013792028961518high-affinity D-ribose transport protein ABC superfamily atp_bindQuickGO ontologyBLASTP
2028932039151023high-affinity D-ribose transport protein ABC superfamily membraneQuickGO ontologyBLASTP