Pre_GI Gene

Host: NC_008278:5053899 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:5053899 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
505389950549271029putative Branched-chain amino acid aminotransferaseQuickGO ontologyBLASTP
50549175055672756hypothetical proteinBLASTP
50557335056455723putative aldolaseQuickGO ontologyBLASTP
50566365056833198hypothetical protein
50568495057199351hypothetical protein
50572585058235978Putative transposaseQuickGO ontologyBLASTP
50580365058740705Putative transposaseQuickGO ontologyBLASTP
50591915059550360hypothetical protein
50597685060301534hypothetical proteinBLASTP
50606345060900267hypothetical protein
506099350631852193Putative eukaryotic-type serinethreonine protein kinaseQuickGO ontologyBLASTP
50633725063743372hypothetical membrane proteinQuickGO ontologyBLASTP
50640035064554552hypothetical proteinBLASTP
506480150661471347hypothetical protein
506623750686092373Putative acyl-CoA transferasescarnitine dehydrataseQuickGO ontologyBLASTP
5068606506869590hypothetical protein
50686975069254558hypothetical proteinBLASTP
50692365069403168hypothetical proteinBLASTP
50695435070175633hypothetical proteinBLASTP
50702335070985753Putative transcriptional regulator GntR-familyQuickGO ontologyBLASTP
507121650726791464tryptophan synthase beta proteinQuickGO ontologyBLASTP
50727395073533795tryptophan synthase alpha proteinQuickGO ontologyBLASTP
507364050769453306carbamoyl phosphate synthase glutamine amidotransferase large subunitQuickGO ontologyBLASTP
507693850780891152carbamoyl phosphate synthetase glutamine amidotransferase small subunitQuickGO ontologyBLASTP
507808650793511266Putative biotin carboxylaseQuickGO ontologyBLASTP
50793485079650303hypothetical protein
507979950810521254hypothetical proteinBLASTP
50811705082123954Putative clavaminate synthase-like oxidaseQuickGO ontologyBLASTP
50821445082314171hypothetical protein putative signal peptideQuickGO ontology
508241250842591848Carbamoyl transferase of the NodUCmcH familyQuickGO ontologyBLASTP
508434250866272286hypothetical proteinBLASTP