Pre_GI Gene

Host: NC_008345:3394154 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008345:3394154 Shewanella frigidimarina NCIMB 400, complete genome

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
339415433966222469peptidase S9 prolyl oligopeptidase active site domain proteinQuickGO ontologyBLASTP
339688433989592076TonB-dependent receptor plugQuickGO ontologyBLASTP
33990363399425390transcriptional regulator MerR family proteinQuickGO ontologyBLASTP
340005134016161566beta-lactamase domain proteinQuickGO ontologyBLASTP
34017463402129384S23 ribosomal proteinQuickGO ontologyBLASTP
340242834037801353phosphoglucosamine mutaseQuickGO ontologyBLASTP
34041593405046888UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
340511334061861074undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferaseQuickGO ontologyBLASTP
340632034073991080undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferaseQuickGO ontologyBLASTP
340791534089701056glycosyl transferase group 1QuickGO ontologyBLASTP
34089673409515549dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
34095163410391876dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
34103943411263870glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
341126334123661104dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
34123823413197816hypothetical proteinBLASTP
34131943414057864glycosyl transferase family 2QuickGO ontologyBLASTP
341404434152191176hypothetical protein
341525334164701218polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
341655034183221773HAD-superfamily phosphatase subfamily IIICQuickGO ontologyBLASTP