Pre_GI Gene

Host: NC_008380:855246 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008380:855246 Rhizobium leguminosarum bv. viciae 3841, complete genome

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8552468600034758putative rhizobiocinQuickGO ontologyBLASTP
860222861048827
861457862269813putative transposaseQuickGO ontologyBLASTP
862293862556264putative transposase-related proteinQuickGO ontologyBLASTP
8627448638591116putative lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
863882864775894putative glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
864868865749882hypothetical proteinBLASTP
865746866135390putative transmembrane proteinQuickGO ontologyBLASTP
866143867084942hypothetical proteinBLASTP
867081867746666putative hexapeptide repeat transferaseQuickGO ontologyBLASTP
867749868345597hypothetical proteinBLASTP
868540869487948putative transmembrane glycosyl transferaseQuickGO ontologyBLASTP
869484870305822putative deoxygenaseQuickGO ontologyBLASTP
8703028716571356hypothetical proteinBLASTP
871887872579693hypothetical proteinBLASTP
8731858752362052putative transmembrane proteinQuickGO ontologyBLASTP
8754138772511839putative transmembrane proteinQuickGO ontologyBLASTP
877338877559222hypothetical protein
877662878372711hypothetical proteinBLASTP
878441878698258putative transmembrane proteinQuickGO ontology
8788688809402073putative polysaccharide synthesisQuickGO ontologyBLASTP
881245882072828hypothetical protein
882077882853777putative beta-glycosyltransferaseQuickGO ontologyBLASTP
8829168840881173putative glycosyltransferaseQuickGO ontologyBLASTP
884085885035951putative UDP-glucose epimeraseQuickGO ontologyBLASTP
885045885887843hypothetical proteinBLASTP
885884886477594putative O-acetyl transferaseQuickGO ontologyBLASTP
8864748875651092hypothetical proteinBLASTP
8875748889321359putative transmembrane proteinQuickGO ontology
8889228900821161putative lipopolysaccharide synthesis proteinQuickGO ontologyBLASTP
890075890833759putative imidazole glycerol phosphate synthasesubunitQuickGO ontologyBLASTP
890830891441612putative imidazole glycerol phosphate synthase subunit igp synthase glutamine amidotransferase subunitQuickGO ontologyBLASTP
8914428930371596putative O-antigen transporterQuickGO ontologyBLASTP
8930348941371104putative DegT family aminotransferaseQuickGO ontologyBLASTP