Pre_GI Gene

Host: NC_008392:542000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008392:542000 Burkholderia cepacia AMMD chromosome 3, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
542210542923714CarboxymethylenebutenolidaseQuickGO ontologyBLASTP
543030544001972aliphatic sulfonates family ABC transporter periplsmic ligand-binding proteinQuickGO ontologyBLASTP
544274545215942transcriptional regulator LysR familyQuickGO ontologyBLASTP
5454525467411290Adenylosuccinate synthaseQuickGO ontologyBLASTP
546883547785903transcriptional regulator LysR familyQuickGO ontologyBLASTP
548002548328327hypothetical proteinBLASTP
5507975521131317hypothetical proteinBLASTP
5522065532371032parB-like partition proteinsQuickGO ontologyBLASTP
553230553925696Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
554315554707393hypothetical protein
5558205569441125Zn-dependent hydrolase of the beta-lactamase fold-like proteinQuickGO ontologyBLASTP
557056557682627transcriptional regulator TetR familyQuickGO ontologyBLASTP
557984558475492flavodoxinnitric oxide synthaseQuickGO ontologyBLASTP
558653559237585hypothetical proteinBLASTP
559892560746855ProQ activator of osmoprotectant transporter ProPQuickGO ontologyBLASTP
5613775624951119protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
562595563002408Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
563106563531426Molybdenum-pterin bindingQuickGO ontologyBLASTP
5637145652131500RND efflux system outer membrane lipoprotein NodT familyQuickGO ontologyBLASTP
565210566205996efflux transporter RND family MFP subunitQuickGO ontologyBLASTP