Pre_GI Gene

Host: NC_008789:942309 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008789:942309 Halorhodospira halophila SL1, complete genome

Host Lineage: Halorhodospira halophila; Halorhodospira; Ectothiorhodospiraceae; Chromatiales; Proteobacteria; Bacteria

General Information: Halorhodospira halophila SL1 was isolated from salt lake mud. Sulfur-oxidizing extreme halophile. This organism, formerly Ectothiorhodospira halophila is alkaliphilic, phototrophic, halophile. This is one of the most halophilic eubacteria known, and produces organic solutes such as glycine betaine, ectoine, and trehalose to balance the osmotic pressure. This organism oxidizes sulfide to sulfur, which is deposited outside the cell and further oxidized to sulfate. This organism also produces a blue light sensor called photoactive yellow protein which is involved in signal transduction.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
942309943004696ribosomal protein L1QuickGO ontologyBLASTP
943008943439432ribosomal protein L11QuickGO ontologyBLASTP
943520944053534NusG antitermination factorQuickGO ontologyBLASTP
944057944467411preprotein translocase SecE subunitQuickGO ontologyBLASTP
94449294456776tRNA-TrpQuickGO ontologyBLASTP
9446269458161191translation elongation factor TuQuickGO ontologyBLASTP
94588194595676tRNA-ThrQuickGO ontologyBLASTP
94599594606874tRNA-GlyQuickGO ontology
94613094621485tRNA-TyrQuickGO ontologyBLASTP
94626394633876tRNA-ThrQuickGO ontology
946358946903546hypothetical protein
946900947664765putative transcriptional acitvator Baf familyQuickGO ontologyBLASTP
947661948638978biotin--acetyl-CoA-carboxylase ligaseQuickGO ontologyBLASTP
9487479488631175S ribosomal RNAQuickGO ontologyBLASTP
948948951851290423S ribosomal RNAQuickGO ontologyBLASTP
95202195209676tRNA-AlaQuickGO ontology
95210895218477tRNA-IleQuickGO ontologyBLASTP
952248953785153816S ribosomal RNAQuickGO ontologyBLASTP
9542089554101203tyrosyl-tRNA synthetaseQuickGO ontologyBLASTP
9555549570651512peptidase M23BQuickGO ontologyBLASTP
9570629581861125protein of unknown function UPF0075QuickGO ontologyBLASTP
958205958576372iron-sulfur cluster assembly accessory proteinQuickGO ontologyBLASTP
9586769597101035N-acetyl-gamma-glutamyl-phosphate reductaseQuickGO ontologyBLASTP
959849960274426conserved hypothetical protein 701QuickGO ontologyBLASTP
960353960859507bacterioferritinQuickGO ontologyBLASTP
960908961180273BFD domain protein 2Fe-2S-binding domain proteinQuickGO ontologyBLASTP
9612509635172268PTSINtr with GAF domain PtsPQuickGO ontologyBLASTP
963529964074546NUDIX hydrolaseQuickGO ontologyBLASTP
964198964881684HAD-superfamily subfamily IB hydrolase TIGR01490QuickGO ontologyBLASTP
964866965237372LrgA family proteinQuickGO ontology
965230965961732LrgB family proteinQuickGO ontologyBLASTP
9659479674791533apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
967466968341876CBS domain containing proteinQuickGO ontologyBLASTP