Pre_GI Gene

Host: NC_009664:4696961 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009664:4696961 Kineococcus radiotolerans SRS30216, complete genome

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46969614697566606NADP oxidoreductase coenzyme F420-dependentQuickGO ontologyBLASTP
469761646989681353NmrA family proteinQuickGO ontologyBLASTP
46989654699318354hypothetical proteinBLASTP
469955347024382886regulatory protein LuxRQuickGO ontologyBLASTP
47025474703086540hypothetical protein
470317847045691392hypothetical proteinBLASTP
47048184705489672hypothetical proteinBLASTP
47055934706207615hypothetical protein
47066174707540924hypothetical proteinBLASTP
47075444708008465hypothetical protein
47081024708560459hypothetical proteinBLASTP
47086944709257564hypothetical proteinBLASTP
47093974709822426hypothetical protein
47100214710833813hypothetical protein
47108394711375537RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
47113934711809417hypothetical protein
47120484712395348hypothetical protein
47125574713378822Integrase catalytic regionQuickGO ontologyBLASTP
47134264713752327transposase IS3IS911 family proteinQuickGO ontologyBLASTP
47138434714274432GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
47144984714986489hypothetical proteinBLASTP
47151224715733612hypothetical protein
47158004716435636hypothetical proteinBLASTP
47164764716805330hypothetical protein
47170974717792696hypothetical protein
47177894718379591RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
47188894719764876hypothetical proteinBLASTP
47200234720379357hypothetical protein
47205974721148552hypothetical protein
47212794721713435hypothetical proteinBLASTP
47220024722499498hypothetical proteinBLASTP
47232074723755549hypothetical proteinBLASTP
47239424724229288Antibiotic biosynthesis monooxygenaseQuickGO ontologyBLASTP
47243304724821492GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
47249754725448474hypothetical proteinBLASTP
47255724725928357hypothetical protein
47260424726350309hypothetical protein
47265754727051477hypothetical protein
47274684727854387hypothetical proteinBLASTP
47278584728106249hypothetical protein
47283554728744390hypothetical protein
47287524729384633hypothetical proteinBLASTP
472938147304541074hypothetical proteinBLASTP
47304514731020570RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
47312644731845582Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
47321654733133969hypothetical protein
473322947350281800hypothetical proteinBLASTP
473516547401715007AAA ATPaseQuickGO ontologyBLASTP
47403294741243915hypothetical protein
47412784741862585RDD domain containing proteinQuickGO ontology
47423554742714360hypothetical protein
47429664743538573hypothetical proteinBLASTP
47437854744369585hypothetical proteinBLASTP
474470247468612160putative cell wall binding repeat 2-containing proteinQuickGO ontologyBLASTP
47472724748015744LrgB family proteinQuickGO ontologyBLASTP
47480124748470459LrgA family proteinQuickGO ontology
474874847496509033-oxoadipate enol-lactonaseQuickGO ontologyBLASTP
474975147520632313hypothetical proteinBLASTP
47520604752953894binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
47529464753896951binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
47538894754077189hypothetical protein
475410847554901383extracellular solute-binding protein family 1QuickGO ontologyBLASTP
475557947571591581malate synthase AQuickGO ontologyBLASTP
475731647584161101Mandelate racemasemuconate lactonizing proteinQuickGO ontologyBLASTP