Pre_GI Gene

Host: NC_009699:3940984 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009699:3940984 Clostridium botulinum F str. Langeland chromosome, complete genome

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum F strain Langeland was identified in 1958 from home-prepared liver paste involved in an outbreak of foodborne botulism on the island of Langeland, in Denmark. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39409843941472489hypothetical proteinBLASTP
39415793942010432hypothetical proteinBLASTP
39421913943096906LysR family transcriptional regulatorQuickGO ontologyBLASTP
394318439443801197subtilase family proteinQuickGO ontologyBLASTP
39444163945297882LysR family transcriptional regulatorQuickGO ontologyBLASTP
39453263946273948D-isomer specific 2-hydroxyacid dehydrogenaseQuickGO ontologyBLASTP
39464733947312840acetyl-CoA carboxylase carboxyl transferase subunit alphaQuickGO ontologyBLASTP
39473593948228870acetyl-CoA carboxylase carboxyl transferase subunit betaQuickGO ontologyBLASTP
394824839495941347biotin carboxylaseQuickGO ontologyBLASTP
394962639500604353R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
39500803950556477acetyl-CoA carboxylase biotin carboxyl carrier proteinQuickGO ontologyBLASTP
3950560395179812393-oxoacyl-ACP synthaseQuickGO ontologyBLASTP
395181839525647473-ketoacyl-ACP reductaseQuickGO ontologyBLASTP
39525823953526945malonyl CoA-acyl carrier protein transacylaseQuickGO ontologyBLASTP
395354739544739272-nitropropane dioxygenaseQuickGO ontologyBLASTP
39545993954823225acyl carrier proteinQuickGO ontologyBLASTP
395486439558449813-oxoacyl-ACP synthaseQuickGO ontologyBLASTP
39558373956313477MarR family transcriptional regulatorQuickGO ontologyBLASTP
3956329395738710592-nitropropane dioxygenaseQuickGO ontologyBLASTP
39574843958419936peptidaseQuickGO ontologyBLASTP
39586003959586987DNA replication protein DnaDQuickGO ontologyBLASTP
39595793960556978DNA replication protein DnaCQuickGO ontologyBLASTP
3961121396119878tRNA-ValQuickGO ontologyBLASTP
3961122396119776tRNA-ValQuickGO ontologyBLASTP
3961215396129177tRNA-GluQuickGO ontologyBLASTP
3961296396137176tRNA-ThrQuickGO ontologyBLASTP
3961376396145277tRNA-AspQuickGO ontologyBLASTP
3961461396153878tRNA-ValQuickGO ontologyBLASTP
3961462396153776tRNA-ValQuickGO ontologyBLASTP
39618023962611810hypothetical proteinBLASTP
39626243962998375CoA-binding proteinQuickGO ontologyBLASTP
396317939644081230pyridine nucleotide-disulfide oxidoreductase family proteinQuickGO ontologyBLASTP
39645103965259750acyl-ACP thioesteraseQuickGO ontologyBLASTP
39653623965547186hypothetical proteinBLASTP
396567339669591287adenylosuccinate synthetaseQuickGO ontologyBLASTP
396719139685761386pyridine nucleotide-disulfide oxidoreductase family proteinQuickGO ontologyBLASTP
39687463968961216hypothetical proteinBLASTP
396914739708681722phosphoglucomutasephosphomannomutase family proteinQuickGO ontologyBLASTP
397111039724471338replicative DNA helicaseQuickGO ontologyBLASTP
397247839743971920ATP-dependent proteaseQuickGO ontologyBLASTP
3974408397485144450S ribosomal protein L9QuickGO ontologyBLASTP
397485139768361986DHH family proteinQuickGO ontologyBLASTP
397683739778411005hypothetical proteinBLASTP
39778533978170318hypothetical proteinBLASTP
3978318397856024330S ribosomal protein S18QuickGO ontologyBLASTP
39785793979025447single-strand binding proteinQuickGO ontologyBLASTP
3979041397932528530S ribosomal protein S6QuickGO ontologyBLASTP
397943139805791149R-2-hydroxyglutaryl-CoA dehydratase subunitQuickGO ontologyBLASTP
39808533981050198hypothetical proteinBLASTP
39810663981935870mechanosensitive ion channel family proteinQuickGO ontologyBLASTP