Pre_GI Gene

Host: NC_009831:2045811 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:2045811 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20458112046551741Formate-C-acetyltransferase-activating enzymeQuickGO ontologyBLASTP
204664520489272283Formate C-acetyltransferaseQuickGO ontologyBLASTP
204953120510631533hypothetical proteinBLASTP
205199420534691476formatenitrite transporterQuickGO ontologyBLASTP
20535382053657120transcriptional regulator LysR familyQuickGO ontologyBLASTP
20537492054660912transcriptional regulator LysR familyQuickGO ontologyBLASTP
20550292055220192hypothetical protein
205521320566641452putative sodiumpantothenate symporterQuickGO ontologyBLASTP
205684320583841542C4-dicarboxylate anaerobic carrierQuickGO ontologyBLASTP
205904820617292682TonB-dependent receptor plugQuickGO ontologyBLASTP
20623032063271969C4-dicarboxylate transportermalic acid transport proteinQuickGO ontologyBLASTP
206338820644611074O-methyltransferase putativeQuickGO ontologyBLASTP
20648832065314432CBS domain containing membrane proteinQuickGO ontologyBLASTP
20655982066263666putative transcriptional regulator TetR familyQuickGO ontologyBLASTP
20666592067627969cysteine synthase AQuickGO ontologyBLASTP
206792220691331212RDD domain containing proteinQuickGO ontologyBLASTP