Pre_GI Gene

Host: NC_010334:2615260 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:2615260 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
261526026164861227efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
261648626196203135transporter hydrophobeamphiphile efflux-1 HAE1 familyQuickGO ontologyBLASTP
261961326211511539RND efflux system outer membrane lipoprotein NodT familyQuickGO ontologyBLASTP
262134826226011254DNA-directed DNA polymeraseQuickGO ontologyBLASTP
26226042623011408peptidase S24 and S26 domain proteinQuickGO ontologyBLASTP
262341626247201305diguanylate cyclaseQuickGO ontologyBLASTP
26248632625066204hypothetical proteinBLASTP
26256122625998387hypothetical proteinBLASTP
26274022628274873hypothetical protein
26288062629516711hypothetical proteinBLASTP
262951026317862277helicase domain proteinQuickGO ontologyBLASTP
26327522633318567hypothetical protein
26333782634127750hypothetical proteinBLASTP
26342522635220969hypothetical proteinBLASTP
263532326366391317hypothetical proteinBLASTP
263732626403733048type III restriction protein res subunitQuickGO ontologyBLASTP
26406792641431753Deoxyribonuclease IQuickGO ontologyBLASTP
264153926427921254DNA-directed DNA polymeraseQuickGO ontologyBLASTP
26427952643202408peptidase S24 and S26 domain proteinQuickGO ontologyBLASTP
264354626457622217hypothetical proteinBLASTP
26459362646739804FRG domain proteinQuickGO ontologyBLASTP
26467822647279498hypothetical protein
264772026489101191hypothetical proteinBLASTP
264901826502081191hypothetical proteinBLASTP
26503212650764444hypothetical proteinBLASTP
265086626532922427hypothetical proteinBLASTP
265328926548361548integrase family proteinQuickGO ontologyBLASTP
265483326561851353phage integraseQuickGO ontologyBLASTP