Pre_GI Gene

Host: NC_010334:835500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:835500 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8355348365951062porin Gram-negative typeQuickGO ontologyBLASTP
836978837799822UBATHIF-type NADFAD binding proteinQuickGO ontologyBLASTP
837988838605618hypothetical proteinBLASTP
838698838832135hypothetical proteinBLASTP
839440840051612transcriptional regulator AraC familyQuickGO ontologyBLASTP
840811841269459aspartate carbamoyltransferase regulatory subunitQuickGO ontologyBLASTP
841269842201933aspartate carbamoyltransferaseQuickGO ontologyBLASTP
8423668436731308major facilitator superfamily MFS_1QuickGO ontologyBLASTP
843702844643942protein of unknown function DUF6 transmembraneQuickGO ontologyBLASTP
8454148466431230Endoribonuclease L-PSPQuickGO ontologyBLASTP
8468098478131005ornithine carbamoyltransferaseQuickGO ontologyBLASTP
847898848839942carbamate kinaseQuickGO ontologyBLASTP
8488918501111221Arginine deiminaseQuickGO ontologyBLASTP
8504088516401233Non-specific serinethreonine protein kinaseQuickGO ontologyBLASTP
852451852969519hypothetical proteinBLASTP
8529748551932220Aldehyde ferredoxin oxidoreductaseQuickGO ontologyBLASTP