Pre_GI Gene

Host: NC_010498:1210145 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1210145 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
121014512126822538putative prophage side tail fiber proteinQuickGO ontologyBLASTP
12125221213427906IS2 transposase orfBQuickGO ontologyBLASTP
12133851213795411IS2 transposase orfAQuickGO ontologyBLASTP
12138591214140282hypothetical proteinBLASTP
121415012151901041hypothetical proteinBLASTP
12152271215520294hypothetical proteinBLASTP
12165011217031531nickel-dependent hydrogenase b-type cytochrome subunitQuickGO ontologyBLASTP
12173741218024651metal-binding proteinQuickGO ontologyBLASTP
12182811218916636hypothetical proteinBLASTP
121891712199211005oxidoreductase molybdopterin bindingQuickGO ontologyBLASTP
12200301220443414transthyretin family proteinQuickGO ontologyBLASTP
12204651221247783heavy metal response regulatorQuickGO ontologyBLASTP
122124712226051359heavy metal sensor histidine kinaseQuickGO ontologyBLASTP
12227121223563852chaperone protein HchAQuickGO ontologyBLASTP
12235841223727144hypothetical proteinBLASTP
12239871224154168hypothetical proteinBLASTP
122415512253181164porin family proteinQuickGO ontologyBLASTP
12259491226251303hypothetical proteinBLASTP
12262911226986696putative metal-dependent phosphohydrolaseQuickGO ontologyBLASTP
122705312284711419DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
12284521228922471very short patch repair proteinQuickGO ontologyBLASTP
12289111229831921carboxylateamino acidamine transporterQuickGO ontologyBLASTP
12300101230921912hypothetical proteinBLASTP
12310001231182183hypothetical proteinBLASTP
123137112330471677diguanylate cyclaseQuickGO ontologyBLASTP
12330441233859816mannosyl-3-phosphoglycerate phosphatase-like proteinQuickGO ontologyBLASTP