Pre_GI Gene

Host: NC_010498:301000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:301000 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3010713023151245fermentation-respiration switch proteinQuickGO ontologyBLASTP
302373302774402sigma factor-binding protein CrlQuickGO ontologyBLASTP
3028133038681056outer membrane pore protein EQuickGO ontologyBLASTP
3041563052591104glutamate 5-kinaseQuickGO ontologyBLASTP
3052713065241254gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
30664030671576tRNA-ThrQuickGO ontologyBLASTP
3068793080631185phage integrase family site specific recombinaseQuickGO ontologyBLASTP
308165309130966hypothetical proteinBLASTP
3096103107731164hypothetical proteinBLASTP
310770311219450response regulatorQuickGO ontologyBLASTP
3112163144913276hypothetical proteinBLASTP
314956315267312IS911 transposase orfAQuickGO ontologyBLASTP
315387316133747IS911 transposase orfBQuickGO ontologyBLASTP
316344316580237BLASTP
316666317124459antirestriction proteinQuickGO ontologyBLASTP
317136317615480RadC family DNA repair proteinQuickGO ontologyBLASTP
317624317845222hypothetical proteinBLASTP
317865318182318putative antitoxin module of toxin-antitoxin systemQuickGO ontologyBLASTP
318634318771138hypothetical protein
318976319149174hypothetical proteinBLASTP
319364319978615hypothetical proteinBLASTP
320437320577141hypothetical protein
320869321579711hypothetical proteinBLASTP
3215483231911644hypothetical proteinBLASTP
3231813257062526hypothetical proteinBLASTP
325732326400669hypothetical proteinBLASTP
326458327045588fimbrillin MatBQuickGO ontologyBLASTP
327120327662543fimbrillin MatAQuickGO ontologyBLASTP
328115328339225hypothetical proteinBLASTP
328398328517120hypothetical protein
328746328886141ribosomal protein L36QuickGO ontologyBLASTP
32888632914926450S ribosomal protein L31 type BQuickGO ontologyBLASTP
3300893312311143oxidoreductase FADFMN-bindingQuickGO ontologyBLASTP
331476332396921hypothetical proteinBLASTP
332553333479927LysR family transcriptional regulatorQuickGO ontologyBLASTP
333679334572894LysR family transcriptional regulatorQuickGO ontologyBLASTP
334603335592990aldoketo reductase family oxidoreductaseQuickGO ontologyBLASTP
335619336470852organophosphate reductaseQuickGO ontologyBLASTP
3370363412894254putative invasinQuickGO ontologyBLASTP
341410342267858AraC family transcriptional regulatorQuickGO ontologyBLASTP
342515343384870aldoketo reductase family oxidoreductaseQuickGO ontologyBLASTP