Pre_GI Gene

Host: NC_010498:4031500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:4031500 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
403153740325621026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
4032572403376811972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
40338144033963150hypothetical proteinBLASTP
40339824034914933ADP-glyceromanno-heptose 6-epimeraseQuickGO ontologyBLASTP
403492440359701047lipopolysaccharide heptosyltransferase IIQuickGO ontologyBLASTP
40359744036945972lipopolysaccharide heptosyltransferase IQuickGO ontologyBLASTP
403701540382681254O-antigen polymeraseQuickGO ontologyBLASTP
40383144039297984glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
403937940404071029lipopolysaccharide 12-galactosyltransferaseQuickGO ontologyBLASTP
40404334041125693lipopolysaccharide core biosynthesis protein RfaYQuickGO ontologyBLASTP
40411354042130996lipopolysaccharide 12-glucosyltransferaseQuickGO ontologyBLASTP
404214740431631017lipopolysaccharide 13-galactosyltransferaseQuickGO ontologyBLASTP
40431794043976798lipopolysaccharide core biosynthesis protein RfaPQuickGO ontologyBLASTP
404396940450931125lipopolysaccharide core biosynthesis protein RfaGQuickGO ontologyBLASTP
404509040461481059lipopolysaccharide core biosynthesis glycosyltransferase RfaQQuickGO ontologyBLASTP
4046561404783812783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
40478464048325480pantetheine-phosphate adenylyltransferaseQuickGO ontologyBLASTP
40483644049173810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
40492714049438168ribosomal protein L33QuickGO ontologyBLASTP
40494594049695237ribosomal protein L28QuickGO ontologyBLASTP
40499124050580669DNA repair protein RadCQuickGO ontologyBLASTP
405075240519721221phosphopantothenoylcysteine decarboxylasephosphopantothenate--cysteine ligaseQuickGO ontologyBLASTP
40519504052408459dUTP diphosphataseQuickGO ontologyBLASTP
40525154053111597transcriptional regulator domain-containing proteinQuickGO ontologyBLASTP