Pre_GI Gene

Host: NC_010524:4402478 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010524:4402478 Leptothrix cholodnii SP-6, complete genome

Host Lineage: Leptothrix cholodnii; Leptothrix; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Leptothrix cholodnii SP-6 was isolated from water and flocculent from an artificial iron seep in Ithaca, NY, USA. Leptothrix cholodnii, like other Leptothrix species is an iron- and manganese-oxidizing, sheathed bacterium common in organic rich aquatic environments. Iron oxides and manganese oxides often coat the sheathes of these organisms.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
440247844046102133PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
44046154405262648two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
44053624406357996thiamine-monophosphate kinaseQuickGO ontologyBLASTP
44063544406911558phosphatidylglycerophosphatase AQuickGO ontologyBLASTP
44069254407434510CinA domain proteinQuickGO ontologyBLASTP
44075404407938399ribosomal protein L17QuickGO ontologyBLASTP
44080424409028987DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
44091654409788624ribosomal protein S4QuickGO ontologyBLASTP
44100074410411405ribosomal protein S11QuickGO ontologyBLASTP
44104424410807366ribosomal protein S13QuickGO ontologyBLASTP
44108434410956114ribosomal protein L36QuickGO ontologyBLASTP
44110134411231219translation initiation factor IF-1QuickGO ontologyBLASTP
441125644125661311preprotein translocase SecY subunitQuickGO ontologyBLASTP
44125934413027435ribosomal protein L15QuickGO ontologyBLASTP
44130534413235183ribosomal protein L30QuickGO ontologyBLASTP
44132524413770519ribosomal protein S5QuickGO ontologyBLASTP
44138004414165366ribosomal protein L18QuickGO ontologyBLASTP
44141774414710534ribosomal protein L6QuickGO ontologyBLASTP
44147274415122396ribosomal protein S8QuickGO ontologyBLASTP
44151594415464306ribosomal protein S14QuickGO ontologyBLASTP
44154734416024552ribosomal protein L5QuickGO ontologyBLASTP
44160384416355318ribosomal protein L24QuickGO ontologyBLASTP
44163774416745369ribosomal protein L14QuickGO ontologyBLASTP
441697744182721296glutamate--cysteine ligaseQuickGO ontologyBLASTP
441840244199161515ammonium transporterQuickGO ontologyBLASTP
44199394420277339nitrogen regulatory protein P-IIQuickGO ontologyBLASTP
442055944220731515Mg chelatase subunit ChlIQuickGO ontologyBLASTP
44221394422882744protein of unknown function DUF558QuickGO ontologyBLASTP
442312144249951875Phosphoenolpyruvate carboxykinase GTPQuickGO ontologyBLASTP
44250784425320243hypothetical protein
44254584426423966transcriptional regulator LysR familyQuickGO ontologyBLASTP
442640244285102109Prolyl oligopeptidaseQuickGO ontologyBLASTP
44285074428989483protein of unknown function UPF0054QuickGO ontologyBLASTP