Pre_GI Gene

Host: NC_010524:933191 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010524:933191 Leptothrix cholodnii SP-6, complete genome

Host Lineage: Leptothrix cholodnii; Leptothrix; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Leptothrix cholodnii SP-6 was isolated from water and flocculent from an artificial iron seep in Ithaca, NY, USA. Leptothrix cholodnii, like other Leptothrix species is an iron- and manganese-oxidizing, sheathed bacterium common in organic rich aquatic environments. Iron oxides and manganese oxides often coat the sheathes of these organisms.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9331919342281038TrbLVirB6 plasmid conjugal transfer proteinQuickGO ontologyBLASTP
934239934658420hypothetical protein
9346559371472493type IV secretionconjugal transfer ATPase VirB4 familyQuickGO ontologyBLASTP
937131937463333type IV secretory pathway VirB3 family proteinQuickGO ontologyBLASTP
937482937772291Conjugal transfer protein TrbCQuickGO ontology
937794938303510Lytic transglycosylase catalyticQuickGO ontologyBLASTP
938318938878561hypothetical proteinBLASTP
938995939759765transcriptional regulator LuxR familyQuickGO ontologyBLASTP
939833940183351hypothetical protein
940530940955426hypothetical proteinBLASTP
941264942208945fatty acid desaturaseQuickGO ontologyBLASTP
9422059434551251hypothetical proteinBLASTP
943524944378855transcriptional regulator LysR familyQuickGO ontologyBLASTP
944832945140309hypothetical protein
945163945390228phage transcriptional regulator AlpAQuickGO ontologyBLASTP
945558946538981Integrase catalytic regionQuickGO ontologyBLASTP
9469099483331425carbohydrate kinase FGGYQuickGO ontologyBLASTP
9483569493571002Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
949423950205783deoxyribose-phosphate aldolasephospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP
950483951244762transcriptional regulator GntR familyQuickGO ontologyBLASTP
951408951569162hypothetical protein
9517829530891308extracellular solute-binding protein family 1QuickGO ontologyBLASTP
953207954049843binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
954046954876831binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
9548959559681074ABC transporter-related proteinQuickGO ontologyBLASTP
9559989576381641Glycerone kinaseQuickGO ontologyBLASTP