Pre_GI Gene

Host: NC_010552:58294 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010552:58294 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58294589506573-oxoacid CoA-transferase B subunitQuickGO ontologyBLASTP
590396041213743-carboxy-ciscis-muconate cycloisomeraseQuickGO ontologyBLASTP
60412611977863-oxoadipate enol-lactonaseQuickGO ontologyBLASTP
61208615943874-carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
61831631891359major facilitator superfamily MFS_1QuickGO ontologyBLASTP
6331263572261hypothetical proteinBLASTP
6366964286618Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
64875662421368hypothetical proteinBLASTP
6746367672210hypothetical protein
6769268099408hypothetical protein
6819868428231BLASTP
6894369656714hypothetical proteinBLASTP
6993670568633hypothetical proteinBLASTP
70565719651401RNA-directed DNA polymerase Reverse transcriptaseQuickGO ontologyBLASTP
72402735711170hypothetical proteinBLASTP
73576754771902hypothetical proteinBLASTP
75474786383165hypothetical proteinBLASTP
7860479533930DNARNA non-specific endonucleaseQuickGO ontologyBLASTP
7954679791246hypothetical protein
80138811931056hypothetical protein
8125381561309hypothetical protein
8237982636258hypothetical proteinBLASTP
8271482983270hypothetical protein
8319983735537hypothetical proteinBLASTP
8380684156351hypothetical protein
8425684567312hypothetical protein
85114862561143hypothetical proteinBLASTP
8686287578717hypothetical proteinBLASTP
8801388417405hypothetical proteinBLASTP
88929906171689hypothetical proteinBLASTP
9091691824909transcriptional regulator LysR familyQuickGO ontologyBLASTP
9194692659714ThiJPfpI domain proteinQuickGO ontologyBLASTP
9268193523843ThiJPfpI domain proteinQuickGO ontologyBLASTP
9358194375795short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
9491995470552hypothetical proteinBLASTP
9550295816315blue type 1 copper domain proteinQuickGO ontologyBLASTP
9581396517705RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
9654197320780PGAP1 family proteinQuickGO ontologyBLASTP
97317984711155hypothetical proteinBLASTP
98660998381179chromate transporter chromate ion transporter CHR familyQuickGO ontologyBLASTP
99835100812978chromate resistance exported proteinQuickGO ontologyBLASTP
100997101269273protein of unknown function DUF156QuickGO ontologyBLASTP
1012811025731293cation diffusion facilitator family transporterQuickGO ontologyBLASTP