Pre_GI Gene

Host: NC_010572:3363830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010572:3363830 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
336383033652301401hypothetical proteinBLASTP
33653573366298942hypothetical proteinBLASTP
33663183366545228hypothetical proteinBLASTP
33665423366802261hypothetical proteinBLASTP
336688733707863900RNA polymerase beta prime subunitQuickGO ontologyBLASTP
337088533744003516RNA polymerase beta subunitQuickGO ontologyBLASTP
33749943375377384putative 50S ribosomal protein L7L12QuickGO ontologyBLASTP
33754623376019558putative 50S ribosomal protein L10QuickGO ontologyBLASTP
33762953377212918putative lipoproteinQuickGO ontologyBLASTP
33773833378105723putative 50S ribosomal protein L1QuickGO ontologyBLASTP
33781863378620435putative 50S ribosomal protein L11QuickGO ontologyBLASTP
33787973379681885putative transcription antitermination factor NusGQuickGO ontologyBLASTP
33797553380042288putative preprotein translocase SecEQuickGO ontologyBLASTP
3380149338022173tRNA-TrpQuickGO ontologyBLASTP
338043433816601227putative aspartate aminotransferaseQuickGO ontologyBLASTP
338178333828141032putative adenosine deaminaseQuickGO ontologyBLASTP
33828073383397591putative TetR-family transcriptional regulatorQuickGO ontologyBLASTP
33834943384129636hypothetical proteinBLASTP
338417833852331056putative UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
33854113385839429hypothetical proteinBLASTP
33858393386291453hypothetical proteinBLASTP
33864163386580165putative 50S ribosomal protein L33QuickGO ontologyBLASTP
3386669338674173tRNA-MetQuickGO ontologyBLASTP
3386787338685973tRNA-ThrQuickGO ontologyBLASTP
338711533884101296hypothetical proteinBLASTP
33884453389101657hypothetical proteinBLASTP
338944733914592013hypothetical proteinBLASTP
33915763392358783hypothetical proteinBLASTP
339234833933641017hypothetical proteinBLASTP
33941603394438279hypothetical proteinBLASTP
33944353394707273hypothetical proteinBLASTP
33947043394901198hypothetical protein
33948983395764867hypothetical proteinBLASTP
33957643396105342hypothetical proteinBLASTP
33961023396383282hypothetical protein
33963983396757360hypothetical proteinBLASTP
33967753396963189hypothetical proteinBLASTP
33970443397367324hypothetical proteinBLASTP
339744733995252079hypothetical proteinBLASTP
33996783399938261hypothetical proteinBLASTP
33999293400117189hypothetical protein
34001293400392264hypothetical proteinBLASTP
340047934015581080hypothetical proteinBLASTP
34015553402439885hypothetical proteinBLASTP
34024363402783348hypothetical protein
340278034039431164hypothetical proteinBLASTP
34041473404335189hypothetical proteinBLASTP
340439734057611365putative integraseQuickGO ontologyBLASTP
3405934340601582tRNA-TyrQuickGO ontologyBLASTP
34061803406668489hypothetical proteinBLASTP
34068673407391525putative methylated-DNA--protein-cysteine S-methyltransferaseQuickGO ontologyBLASTP
34073983408090693putative DNA repair proteinQuickGO ontologyBLASTP
34081363408408273hypothetical proteinBLASTP
34085543408946393hypothetical proteinBLASTP
34089433409806864putative M48-family peptidaseQuickGO ontologyBLASTP
34100613410528468putative large-conductance mechanosensitive channel proteinQuickGO ontologyBLASTP
341064334122411599putative NADH dehydrogenase chain NQuickGO ontologyBLASTP
341223834139051668putative NADH dehydrogenase chain MQuickGO ontologyBLASTP
341390234159022001putative NADH dehydrogenase chain LQuickGO ontologyBLASTP
34158993416345447putative NADH dehydrogenase chain KQuickGO ontologyBLASTP
34163453417031687putative NADH dehydrogenase chain JQuickGO ontologyBLASTP
34170283417615588putative NADH dehydrogenase chain IQuickGO ontologyBLASTP
34176153418583969putative NADH dehydrogenase chain HQuickGO ontologyBLASTP
341858034200491470putative NADH dehydrogenase subunitQuickGO ontologyBLASTP
34200463420753708putative NADH dehydrogenase chain BQuickGO ontologyBLASTP
34207443421214471putative NADH dehydrogenase chain AQuickGO ontologyBLASTP