Pre_GI Gene

Host: NC_010610:107500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010610:107500 Lactobacillus fermentum IFO 3956, complete genome

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1075531086531101transposaseQuickGO ontologyBLASTP
1088011098021002hypothetical proteinBLASTP
109802110572771hypothetical proteinBLASTP
110589111332744exopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
111353112123771exopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
112240112791552capsular polysaccharide synthesis proteinQuickGO ontologyBLASTP
112815113669855putative glycosyltransferaseQuickGO ontologyBLASTP
113686114498813hypothetical proteinBLASTP
1145181157531236hypothetical proteinBLASTP
1157501167511002hypothetical proteinBLASTP
1167681178711104hypothetical proteinBLASTP
117881118753873putative glycosyltransferasesQuickGO ontologyBLASTP
1187581202661509putative flippaseQuickGO ontologyBLASTP
120285121154870glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
121158121739582dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
1217501227811032dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
122844123701858dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
1240051252251221transposaseQuickGO ontologyBLASTP
1262831274911209hypothetical proteinBLASTP
127627127902276hypothetical protein
127906128106201hypothetical protein
128347129072726hypothetical protein
129815130177363hypothetical proteinBLASTP
130825131331507hypothetical proteinBLASTP
131528132217690two-component response regulatorQuickGO ontologyBLASTP
1324151335571143two-component system histidine kinaseQuickGO ontologyBLASTP
1336171348521236D-alanyl-D-alanineQuickGO ontologyBLASTP