Pre_GI Gene

Host: NC_010634 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010634:3720214 Yersinia pseudotuberculosis PB1/+, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
372021437223762163OrnLysArg decarboxylase major regionQuickGO ontologyBLASTP
3723045372312076tRNA-PheQuickGO ontologyBLASTP
37233733723522150integraseQuickGO ontologyBLASTP
37237053724298594hypothetical proteinBLASTP
37249493725317369IS1 transposaseQuickGO ontologyBLASTP
37253713725646276insertion element proteinQuickGO ontologyBLASTP
37257423726509768hypothetical proteinBLASTP
372649637287932298peptidase M23QuickGO ontologyBLASTP
37288093729240432rhs element Vgr proteinQuickGO ontologyBLASTP
37293403729444105rhs element Vgr proteinQuickGO ontologyBLASTP
37303663730641276insertion element proteinQuickGO ontologyBLASTP
37310583731567510hypothetical proteinBLASTP
373156837337902223peptidase M23QuickGO ontologyBLASTP
373380537361532349type VI secretion system Vgr family proteinQuickGO ontologyBLASTP
373615037387982649type VI secretion ATPaseQuickGO ontologyBLASTP
37392163739707492Hcp1 family type VI secretion system effectorQuickGO ontologyBLASTP
373971137414471737OmpAMotB domain-containing proteinQuickGO ontologyBLASTP
37414473742133687hypothetical proteinBLASTP
374213037434821353type VI secretion proteinQuickGO ontologyBLASTP
374349437450321539EvpB family type VI secretion proteinQuickGO ontologyBLASTP
37450813745581501type VI secretion proteinQuickGO ontologyBLASTP
37467913746946156hypothetical proteinBLASTP
37469893747360372hypothetical proteinBLASTP
37475173747780264insertion element proteinQuickGO ontologyBLASTP
37478483748177330lipoproteinQuickGO ontologyBLASTP
37486943749344651abortive infection proteinQuickGO ontologyBLASTP
37498883750010123hypothetical protein
37500453750191147hypothetical protein
37505153751165651autoinducer synthesis proteinQuickGO ontologyBLASTP
37511463751889744LuxR family transcriptional regulatorQuickGO ontologyBLASTP
375245137538091359hypothetical proteinBLASTP