Pre_GI Gene

Host: NC_010673:703816 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010673:703816 Borrelia hermsii DAH, complete genome

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
703816704562747phosphoglycerate mutaseQuickGO ontologyBLASTP
7046457062101566class 1 lysyl-tRNA synthetaseQuickGO ontologyBLASTP
706297707169873hypothetical proteinBLASTP
707266707622357hypothetical proteinBLASTP
707635708042408hypothetical proteinBLASTP
708039708473435hypothetical proteinBLASTP
708474709121648hypothetical proteinBLASTP
709165710124960hypothetical proteinBLASTP
7100877111121026N-acetylmuramoyl-L-alanine amidaseQuickGO ontologyBLASTP
711093711641549flagellar filament outsheath proteinQuickGO ontologyBLASTP
7117207127541035flagellar filament outer layer proteinQuickGO ontologyBLASTP
7128297153992571chemotaxis protein CheAQuickGO ontologyBLASTP
7154047167831380chemotaxis protein CheWQuickGO ontologyBLASTP
716795717280486pili chemotaxis protein methyltransferase CheR-like PilKQuickGO ontologyBLASTP
717329717769441two-component response regulatorQuickGO ontologyBLASTP
717785718300516hypothetical proteinBLASTP
7182977193431047hypothetical proteinBLASTP
719337720200864hypothetical proteinBLASTP
720197720859663putative phosphataseQuickGO ontologyBLASTP
7210537226571605nucleoside transport ATP-binding proteinQuickGO ontologyBLASTP
7226587238091152nucleoside transport system permease proteinQuickGO ontologyBLASTP
723781724707927hypothetical proteinBLASTP
7248357270872253methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
7271177290241908methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
7290807301531074tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseQuickGO ontologyBLASTP
7302087314641257hydroxymethylglutaryl-CoA synthaseQuickGO ontologyBLASTP
7314337325121080isopentenyl-diphosphate delta-isomeraseQuickGO ontologyBLASTP
7324787337521275hypothetical proteinBLASTP
733754734692939diphosphomevalonate decarboxylaseQuickGO ontologyBLASTP
734683735624942hypothetical proteinBLASTP
735625736518894mevalonate kinaseQuickGO ontologyBLASTP
736890737333444hypothetical proteinBLASTP
737405737938534neutrophil-activating protein AQuickGO ontologyBLASTP
7380107400702061protein translation elongation factor G EF-GQuickGO ontologyBLASTP
7403827415901209hypothetical proteinBLASTP
7416507429991350signal recognition particle subunit FFHSRP54QuickGO ontologyBLASTP
742996743247252SSU ribosomal protein S16PQuickGO ontologyBLASTP
743257743505249RNA binding proteinQuickGO ontologyBLASTP
74350974400950116S rRNA processing protein RimMQuickGO ontologyBLASTP
744006744725720hypothetical proteinBLASTP
744700745065366LSU ribosomal protein L19PQuickGO ontologyBLASTP
745043745873831hypothetical proteinBLASTP
745870746130261flagellar biosynthetic protein FlhBQuickGO ontologyBLASTP
746444747001558hypothetical proteinBLASTP
747004747501498phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
747553747735183LSU ribosomal protein L32PQuickGO ontologyBLASTP
747737748000264acyl carrier proteinQuickGO ontologyBLASTP
748006748737732ribonuclease IIIQuickGO ontologyBLASTP
7487157499321218polyA polymeraseQuickGO ontologyBLASTP
7500197518241806hypothetical proteinBLASTP
751828752154327hypothetical proteinBLASTP
75229875237982tRNA-TyrQuickGO ontologyBLASTP
7526177536511035hypothetical proteinBLASTP
7536587554391782DNA primaseQuickGO ontologyBLASTP
7554327573241893RNA polymerase sigma factor RpoDQuickGO ontologyBLASTP