Pre_GI Gene

Host: NC_010723:1133163 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010723:1133163 Clostridium botulinum E3 str. Alaska E43, complete genome

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11331631133726564RNA polymerase sigma-70 factor familyQuickGO ontologyBLASTP
113371911347891071hypothetical proteinBLASTP
11352001135760561membrane protein DedA familyQuickGO ontologyBLASTP
11359191136845927conserved protein tetratricopeptide repeat family proteinQuickGO ontologyBLASTP
11370291137532504hypothetical proteinBLASTP
11376521138302651putative lipoproteinQuickGO ontologyBLASTP
11385531139002450MarR-family transcriptional regulatorQuickGO ontologyBLASTP
113901711399859693-oxoacyl-acyl-carrier-protein synthase IIIQuickGO ontologyBLASTP
11401001140324225acyl carrier protein homologQuickGO ontologyBLASTP
11404341141375942putative enoyl-acyl-carrier-protein reductase IIQuickGO ontologyBLASTP
11413681142309942malonyl CoA-acyl carrier protein transacylaseQuickGO ontologyBLASTP
114233011430707413-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
1143088114432912423-oxoacyl-acyl-carrier-protein synthase 2QuickGO ontologyBLASTP
11443411144835495acetyl-CoA carboxylase biotin carboxyl carrier proteinQuickGO ontologyBLASTP
11448411145269429beta-hydroxyacyl-acyl-carrier-protein dehydratase FabZQuickGO ontologyBLASTP
114527911466311353acetyl-CoA carboxylase biotin carboxylaseQuickGO ontologyBLASTP
11466241147499876acetyl-CoA carboxylase carboxyl transferase beta subunitQuickGO ontologyBLASTP
11474921148316825acetyl-CoA carboxylase carboxyl transferase alpha subunitQuickGO ontologyBLASTP
11484981149439942hypothetical proteinBLASTP
11494731149886414HutP superfamilyQuickGO ontologyBLASTP
11503071151107801oxidoreductase short chain dehydrogenasereductase familyQuickGO ontologyBLASTP