Pre_GI Gene

Host: NC_010803 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010803:2444120 Chlorobium limicola DSM 245, complete genome

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24441202444503384ribosomal protein S11QuickGO ontologyBLASTP
24445472444924378ribosomal protein S13QuickGO ontologyBLASTP
24449602445076117ribosomal protein L36QuickGO ontologyBLASTP
24451902445408219translation initiation factor IF-1QuickGO ontologyBLASTP
24454482446245798methionine aminopeptidase type IQuickGO ontologyBLASTP
244625624475871332preprotein translocase SecY subunitQuickGO ontologyBLASTP
24476062448169564ribosomal protein L15QuickGO ontologyBLASTP
24482022448387186ribosomal protein L30QuickGO ontologyBLASTP
24484072448925519ribosomal protein S5QuickGO ontologyBLASTP
24489482449307360ribosomal protein L18PL5EQuickGO ontologyBLASTP
24493632449902540ribosomal protein L6QuickGO ontologyBLASTP
24499312450326396ribosomal protein S8QuickGO ontologyBLASTP
24503912450660270ribosomal protein S14QuickGO ontologyBLASTP
24506792451266588ribosomal protein L5QuickGO ontologyBLASTP
24513232451565243ribosomal protein L24QuickGO ontologyBLASTP
2451599245167173tRNA-GlyQuickGO ontology
24516812452049369ribosomal protein L14QuickGO ontologyBLASTP
24520862452385300ribosomal protein S17QuickGO ontologyBLASTP
24524152452621207ribosomal protein L29QuickGO ontologyBLASTP
24526552453074420ribosomal protein L16QuickGO ontologyBLASTP
24531172453872756ribosomal protein S3QuickGO ontologyBLASTP
24538932454249357ribosomal protein L22QuickGO ontologyBLASTP
24542782454574297ribosomal protein S19QuickGO ontologyBLASTP
24546082455402795ribosomal protein L2QuickGO ontologyBLASTP
24554782455789312Ribosomal protein L25L23QuickGO ontologyBLASTP
24558222456448627ribosomal protein L4L1eQuickGO ontologyBLASTP
24564682457097630ribosomal protein L3QuickGO ontologyBLASTP
24571212457432312ribosomal protein S10QuickGO ontologyBLASTP
245751424586951182translation elongation factor TuQuickGO ontologyBLASTP
245876424608782115translation elongation factor GQuickGO ontologyBLASTP
24609212461388468ribosomal protein S7QuickGO ontologyBLASTP
24614152461822408ribosomal protein S12QuickGO ontologyBLASTP
246200624632861281hypothetical proteinBLASTP
24636622464480819acid phosphatase Class BQuickGO ontologyBLASTP