Pre_GI Gene

Host: NC_011000:1216430 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:1216430 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12164301217254825putative phosphodiesteraseQuickGO ontologyBLASTP
121733912183701032ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
12183841219232849putative ABC transporter membrane proteinQuickGO ontologyBLASTP
12192971220121825putative ABC transporter membrane proteinQuickGO ontologyBLASTP
122013912211671029extracellular solute-binding proteinQuickGO ontologyBLASTP
122124212222671026LacI family regulatory proteinQuickGO ontologyBLASTP
122309912243011203putative integraseQuickGO ontologyBLASTP
12243681225225858hypothetical proteinBLASTP
12254991225702204hypothetical proteinBLASTP
12257061226032327hypothetical proteinBLASTP
122607812275351458hypothetical proteinBLASTP
12275321227840309hypothetical protein
122824912294481200hypothetical proteinBLASTP
12319811232850870hypothetical proteinBLASTP
12328431233166324putative DNA-binding proteinQuickGO ontologyBLASTP
12332021233489288hypothetical protein
123359312348371245hypothetical proteinBLASTP
12348381235308471hypothetical proteinBLASTP
12375191238112594hypothetical proteinBLASTP
12382511239141891putative hydrolaseQuickGO ontologyBLASTP
12392021240122921BLASTP
12402061240472267putative transposaseQuickGO ontologyBLASTP
12405051241335831transposaseQuickGO ontologyBLASTP
12413831241745363BLASTP
12426811243580900hypothetical proteinBLASTP
124365812450311374hypothetical proteinBLASTP
124511112464931383AraC family regulatory proteinQuickGO ontologyBLASTP
124692812480491122glycosyltransferaseQuickGO ontologyBLASTP
12480461248807762putative polysaccharide deacetylaseQuickGO ontologyBLASTP
124880412506061803hypothetical proteinBLASTP
125091712520081092AraC family regulatory proteinQuickGO ontologyBLASTP