Pre_GI Gene

Host: NC_011000:2831183 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:2831183 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28311832832142960AraC family regulatory proteinQuickGO ontologyBLASTP
28322652832831567carboxymuconolactone decarboxylase family proteinQuickGO ontologyBLASTP
283280428339191116hypothetical proteinBLASTP
28339162834710795ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
28359052836732828putative transmembrane protein of ABC transporterQuickGO ontologyBLASTP
28370242837785762DJ-1PfpI family proteinQuickGO ontologyBLASTP
28378722838675804putative hydrolaseQuickGO ontologyBLASTP
28388362839753918LysR family regulatory proteinQuickGO ontologyBLASTP
28399972840533537hypothetical protein
28416522841915264transposaseQuickGO ontologyBLASTP
28422692843060792metallo-beta-lactamase superfamily proteinQuickGO ontologyBLASTP
284380428448531050putative nitrilaseQuickGO ontologyBLASTP
28449052845858954AraC family regulatory proteinQuickGO ontologyBLASTP
28460872846962876putative alcohol dehydrogenaseQuickGO ontologyBLASTP
284712028484991380BLASTP
28499542850217264transposaseQuickGO ontologyBLASTP
28531212854086966putative transposaseQuickGO ontologyBLASTP
285450528559741470hypothetical proteinBLASTP
28561982856545348hypothetical proteinBLASTP
28566092856821213putative DNA-binding proteinQuickGO ontologyBLASTP
28574372858378942hypothetical protein