Pre_GI Gene

Host: NC_011000:3514338 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011000:3514338 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
35134243514341918UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
351433835219877650capsular polysaccharide biosynthesis fatty acid synthaseQuickGO ontologyBLASTP
352199135235111521putative capsular polysaccharide biosynthesis sulfatase membrane proteinQuickGO ontologyBLASTP
35235173524311795putative capsular polysaccharide biosynthesis dehydrogenasereductase proteinQuickGO ontologyBLASTP
35261413526404264transposaseQuickGO ontologyBLASTP
352766235294581797hypothetical proteinBLASTP
35304733531018546hypothetical proteinBLASTP
353127435332051932hypothetical proteinBLASTP
35340113534439429hypothetical protein
35345643535046483hypothetical protein
353523935362821044hypothetical protein
353630735379051599hypothetical proteinBLASTP
35391103540081972glcosyltransferaseQuickGO ontologyBLASTP
35401043541036933glycosyltransferaseQuickGO ontologyBLASTP
354108535422361152putative UDP-galactopyranose mutaseQuickGO ontologyBLASTP
35423223542705384putative transposaseQuickGO ontologyBLASTP
35427023543040339putative transposaseQuickGO ontologyBLASTP
354310435446571554putative transposaseQuickGO ontologyBLASTP
354477835474832706glucosyltransferaseQuickGO ontologyBLASTP
35475043548157654putative capsular polysaccharide transporter ATP-binding proteinQuickGO ontologyBLASTP
35481673548961795putative capsular polysaccharide export protein ABC transporter membrane proteinQuickGO ontologyBLASTP
354895135500571107putative capsule polysaccharide export protein ABC transporter membrane proteinQuickGO ontologyBLASTP
355013135513031173putative capsular polysaccharide biosynthesisexport proteinQuickGO ontologyBLASTP
355145835526091152glycosyltransferaseQuickGO ontologyBLASTP
355260635545341929capsule polysaccharide export proteinQuickGO ontologyBLASTP
355499635564231428putative GDP-mannose pyrophosphorylaseQuickGO ontologyBLASTP
35566223557434813mechanosensitive ion channel proteinQuickGO ontologyBLASTP
355821635594841269putative transposaseQuickGO ontologyBLASTP
35602343560527294putative transposaseQuickGO ontologyBLASTP
35614543561978525putative transposaseQuickGO ontologyBLASTP
35620713562754684putative DedA family proteinQuickGO ontologyBLASTP
356292835649251998DNA mismatch repair proteinQuickGO ontologyBLASTP
35649223565902981tRNA delta2-isopentenylpyrophosphate transferaseQuickGO ontologyBLASTP